Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01952 ATGGAGAATATAAGGGATCAAAGTCGGCGTGTTCGCATGGAGAATGCTTCTGGGTGCCTTATTGGTTACAATTGTTTGGCTTCCAAACATGAGTCGAATAATGGGTTTGATGATACCAGCTCCGAAGATTCAATATCTGAGACTACAAGCAATGAAGAATCAGTAGTTTCAGATTGTGAAAGTGGTGTTCTGGGTTCCAGTTTTGACCAGCGCCAACTGTTTGATGAAGGGTCTCTTAGGCTTTATGAAGGGGATAAGGCTCATGACCTCATCCGATTGAGGTTTATTTCTGGTTTGGGCTTGCTTGGGGCGAGAGCAGAAGTGGTTGCTATTCACAGGAATGGATTCTCCAGTGTTATGGCACAAGCAAAGGCTCAGACATTTCGGGTTTATATGAATGCTGTCGCAAACAAGTGCGGTGGCAATGCAAATGTTCGATATGCTTGGTATGGTGCTTCTGGTAAGGCCGAGATACGTGAAATCATGACACATGGTTTTGGTTATCGTGGGAACACTCAGAATCGTGGGTTATATGGTTGCGGAGTTTATCTAGCTCCAGATAAATTTCCATTAGAAAGTGTTAAGGCTTCTGTTGCTGATAAAGACGGCGTTAGGCATTTGTTGCTTTGTCGTGTTATATTGGGAAAAACCGAGCTTGTTCAACCTGGTTCTGAGCAGTATCATCCAAGCAATGAAGAGTTTGATACAGGGGTGGATGATGTCCAGAATCCCAAGAAATTCATTGTCTGGACCACCCACATGAACACTCATATCTTTCCAGAATATGTGATCAGTTTCCGAATTCCTTCGTTGGCAGGTATTGCTCGTGTTCAAGAACCTTTGAGGAAACCTACTTCGCCTTGGATGCCTTTTCCAGCTCTAATTTCTGTTCTGTCTAAGTTCCTCCCTCCTCCTACTATGACATTGCTTTTGGGCTATCACAAAGCTCACAAGGAAGGAAAGATGTCACGGTCTGAATTAATAAAACAACTCAGACAACTAGCTGGTGACAAGCTGCTGATTGACGTGATCAAAGCATTCAGAGCCAAGGAGTTAAAACAGCAATCAAGGGAACAGAATTGGTTCAAGGATAGTCCGAGAGAGCAGGCAAAGAGAATGATGTGA 1125 0.4364 MENIRDQSRRVRMENASGCLIGYNCLASKHESNNGFDDTSSEDSISETTSNEESVVSDCESGVLGSSFDQRQLFDEGSLRLYEGDKAHDLIRLRFISGLGLLGARAEVVAIHRNGFSSVMAQAKAQTFRVYMNAVANKCGGNANVRYAWYGASGKAEIREIMTHGFGYRGNTQNRGLYGCGVYLAPDKFPLESVKASVADKDGVRHLLLCRVILGKTELVQPGSEQYHPSNEEFDTGVDDVQNPKKFIVWTTHMNTHIFPEYVISFRIPSLAGIARVQEPLRKPTSPWMPFPALISVLSKFLPPPTMTLLLGYHKAHKEGKMSRSELIKQLRQLAGDKLLIDVIKAFRAKELKQQSREQNWFKDSPREQAKRMM* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01952 374 Pfam RCD1-SRO-TAF4 (RST) plant domain 283 348 IPR022003 -
Pte1g01952 374 ProSiteProfiles RST domain profile. 282 353 IPR022003 -
Pte1g01952 374 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 38 349 IPR044964 -
Pte1g01952 374 SUPERFAMILY ADP-ribosylation 81 267 - -
Pte1g01952 374 Gene3D - 79 267 - -
Pte1g01952 374 ProSiteProfiles PARP catalytic domain profile. 68 289 IPR012317 GO:0003950
Pte1g01952 374 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01952 Pte-Chr1 40825031 40828367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01952 - - qsa:O6P43_030870 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01952 1 40825031 40828367 Pte1g01952 1 40825031 40828367 RCT