Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01942 ATGCATTTAGGATTGCAGGTTGCCAAAACTCACATCAAGCATTGCTTCATATATCCCAAACCCCGGAGCCTTCTCTTTTTCTCGATTCTTCTGTCAATGGCATTACGTGCGCTTCTTCTGTTGGGGTTCTTACTGATCTCCCTTGCTCAGGTTTCATCTGATCTTAACTTACAAGAAGATCAATCGCCAGCTTTCGATGGCTCTGTGAGAGGTGGTAACAGACGGCTTATGAAAGACATAGAATGTGGAGAACTGTGCAAGGTGAGATGCAGTCTTCATTCTAGGCCCAAGGTTTGCCTCAGGGCATGTGGGACTTGCTGCTTCAGGTGCAAGTGTGTGCCACCAGGTACATCAGGCAACAAAGAGGTATGCGGCAAATGCTACACTGGCATGACCACCCATGGCAATCAAACCAAGTGCCCCTAG 426 0.4789 MHLGLQVAKTHIKHCFIYPKPRSLLFFSILLSMALRALLLLGFLLISLAQVSSDLNLQEDQSPAFDGSVRGGNRRLMKDIECGELCKVRCSLHSRPKVCLRACGTCCFRCKCVPPGTSGNKEVCGKCYTGMTTHGNQTKCP* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01942 141 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 34 141 - -
Pte1g01942 141 Pfam Gibberellin regulated protein 81 141 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01942 Pte-Chr1 40604561 40605339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01942 - - vri:117903990 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01942 1 40604561 40605339 Pte1g01942 1 40604561 40605339 RCT