Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01680 ATGGAGTCTGTTGCATCCAATTCCTCCTCATCCTCCTATAACCATTGTACACGCTTCAAACCCAGTCAACCGGTTGCCGAGCGGATTATTCGGGCACTTCGCCACCGCCTCCTCCTACTTCACCGGTCCGATTCTGCTTTCTTCGTATTGGGTGCCACCGGAAATGTGTACACCGTGACCTTATCCACCAAACCATCATGCACATGTCCTGACCGTACAGCTCCATGCAAGCATATTCTGTTTGTCTTCATCAGAGTTTTAGGGGCGTCTCTGGACGATGTCTGCATACGAAGGAGTACTCTAAGGCCATGCCAGCTTAATCGTCTTCTCAGAATGCCCACCTTGCCTGACTCTGTTGCAGGGATAAGCCTCCGTGAAAGGTTTCACCAGCTATTCTTTCGAATGGGGCAAGATAATTTGAGACCAGTTGTTGAGGTAGAGGATGGAACGACCTGTCCGGTATGCCTTGAAGTAATGGGGAAACAAGAAAGGGTCGTGGCTTGCCGGACATGCCGGAATGCGATTCATGAAGAATGCTTGGTGAGGTGGAAGAGAAGCAGAGGAAGGAGGTCGCTTAATTGTGTGATTTGCAGGGCACGGTGGAGGGAATTTAGGAGCGATCAGCAAGATAAGTATCTGAATCTTGCGGCTTATGTTAGTGAGGATGATGTAGGAGATGTCAATGGTGGGACCTCCTGTGCTGTTTGA 708 0.4972 MESVASNSSSSSYNHCTRFKPSQPVAERIIRALRHRLLLLHRSDSAFFVLGATGNVYTVTLSTKPSCTCPDRTAPCKHILFVFIRVLGASLDDVCIRRSTLRPCQLNRLLRMPTLPDSVAGISLRERFHQLFFRMGQDNLRPVVEVEDGTTCPVCLEVMGKQERVVACRTCRNAIHEECLVRWKRSRGRRSLNCVICRARWREFRSDQQDKYLNLAAYVSEDDVGDVNGGTSCAV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01680 235 Pfam SWIM zinc finger 57 85 IPR007527 GO:0008270
Pte1g01680 235 ProSiteProfiles Zinc finger RING-type profile. 152 198 IPR001841 -
Pte1g01680 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 224 IPR013083 -
Pte1g01680 235 ProSiteProfiles Zinc finger SWIM-type profile. 57 87 IPR007527 GO:0008270
Pte1g01680 235 Pfam Ring finger domain 151 198 IPR001841 -
Pte1g01680 235 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 17 215 IPR039903 GO:0061630
Pte1g01680 235 SUPERFAMILY RING/U-box 146 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01680 Pte-Chr1 38331519 38333150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01680 - - qsa:O6P43_015491 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01680 1 38331519 38333150 Pte1g01680 1 38331519 38333150 RCT