Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01676 ATGGCTTCCGGTACTATTATTTTATCAGCTACCATAAACTCCACGGTTACGCGATCAGAAATGGTTTTTCCTAGTAAACTCAGTCATGTGAAGAGCAGCTGTTCCTTCAGGAAGAAGAGTAGTGGTACTGTCAAGGACTTCAAAGTGCTTAATGTTACCACTCCATTAGCTCCGCCAACAGAACGAGCAAGGAACGATGATCATCGCCATCACGTTGCCTGGACTAGTGTCCAGCAAGAGTGTTGGGAGGGCGAGCTGGTCGTAGAAGGAGAAATTCCATTGTGGCTGAAAGGAACGTACTTGAGGAATGGTCCTGGCATGTGGCACATAGGGGACTACAACTTCCGTCATCTCTTTGATGGTTACGCTACAATAGTCAAGCTTCACTTCGAGGATGGCCGATTGATCGCCGGTCACCGGCAAATCGAATCGGAAGCCTATAAAGCTGCCATGAAGAACAAAAAGTTATGTTACCGTGAATTCTCTGAGGTTCCAAAGCATGACAACTTCTTAGCCTATGTTGGTGAGCTTGCACATTTGTTCTCTGGTGCATCATTAACAGATAATGCAAACACTGGAGTGGTTAAGCTTGGAGATGGACGTGTAGTTTGCTTGACAGAAACTCAAAAAGGGTCATTGGTGATTGACCCATACACATTGGAGACGTTGGGAAAATTTGAGTACAGTGACTCATTAGGGGGTCTAATACACTCAGCACACCCAATAGTGACAGCTACAGAATTCTTGACCTTGTTGCCAGATTTGGTGAACCCTGGGTACTTGGTGGTGAGGATGGAGCCAGGTAGCAACGAGAGGAAGGTAATCGGGCGGGTCAATTGCCGGGGCAAACCGTCTCCAGGATGGGTCCACTCGTTCCCGGTGACGGAACACTACGTTGTGGTGCCTGAGATGCCACTGAGATATTGTGCCCAAAATTTGCTGAAGGCTGAGCCCACACCATTATACAAGTTTGAGTGGCATCCTGATTCCAAAGGCTTTCTACATGTTATGTGCAAAGCTAGTGGCAAGATTGTGGCGAGTGTGGAAGTGCCATTATTCATTACATTCCATTTTATCAATGCCTACGAGGGAAAAGACGAGGATGGAAGAGTGACATCGATTATTGCAGATTGTTGTGAGCACAATGCCAATACCACTATTCTTGATAGGCTGAGGCTTCAGAATCTTCGTTCTTTCAATGGCGAAGATGTACTACCAGATGCTAGGGTTGGACGATTCATAATACCACTAGATGGGAGCCAATATGGCAAGTTAGAGGCAGCACTACCCCCAGATGAACATGGGAAAGGCATGGATATGTGCAGCATTAACCCTAACTTTTTGGGGAAACAATACAGATATGCTTACGCATGCGGAGCAAAACGCCCATGTAACTTTCCCAACACTCTCACCAAGCTTGATCTAGTGAACAAGAATGCCAAGAACTGGTATGAGGAGGGCGCTGTGCCTTCAGAGCCACTCTTTGTAGCTCGGCCTGGTGCTACAGAGGAAGATGATGGTGTAGCAATCTCCATGATAAGTCAGGAAAATGGCGAGGGATATGCACTGGTGTTAGATGGCTCAACTTTTGAAGAGATTGCGAGAGCTAAATTCCCTTATGGTCTCCCATATGGATTGCATGGATGCTGGGTTCCAAAGACGTGA 1665 0.4661 MASGTIILSATINSTVTRSEMVFPSKLSHVKSSCSFRKKSSGTVKDFKVLNVTTPLAPPTERARNDDHRHHVAWTSVQQECWEGELVVEGEIPLWLKGTYLRNGPGMWHIGDYNFRHLFDGYATIVKLHFEDGRLIAGHRQIESEAYKAAMKNKKLCYREFSEVPKHDNFLAYVGELAHLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSLVIDPYTLETLGKFEYSDSLGGLIHSAHPIVTATEFLTLLPDLVNPGYLVVRMEPGSNERKVIGRVNCRGKPSPGWVHSFPVTEHYVVVPEMPLRYCAQNLLKAEPTPLYKFEWHPDSKGFLHVMCKASGKIVASVEVPLFITFHFINAYEGKDEDGRVTSIIADCCEHNANTTILDRLRLQNLRSFNGEDVLPDARVGRFIIPLDGSQYGKLEAALPPDEHGKGMDMCSINPNFLGKQYRYAYACGAKRPCNFPNTLTKLDLVNKNAKNWYEEGAVPSEPLFVARPGATEEDDGVAISMISQENGEGYALVLDGSTFEEIARAKFPYGLPYGLHGCWVPKT* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01676 554 Pfam Retinal pigment epithelial membrane protein 75 552 IPR004294 GO:0016702
Pte1g01676 554 PANTHER BETA-CAROTENE DIOXYGENASE 74 552 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01676 Pte-Chr1 38307086 38309957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01676 K17913 - qsa:O6P43_019476 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01676 1 38307086 38309957 Pte1g01676 1 38307086 38309957 RCT