Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01671 ATGGAGTTCTACGGGAGAAAGCCTCTCCGTAGTTTCATAAACGAAGAAGAAAAAACAAGGCAATCTCCTAACCCTTGTGTTCCAAGCCATGAAGAGACACGTGAAGAAGATCTACAAGACATGCAATTTAGTCCTGCAATGCCTTCGAGCCCAGATGGGAGACCATCAGTTACAGCATCACTACCACGACCAAGTAGTCCAGGGTCACCTTGGACACTTTCTCCTCGTCAACCACCACCATCTTCACTGCTTTACCACTGCATAGCCTCACTCCATCGCCATGAAGGTAATGTCTATGCAATCACATTCTCAAAGGGCTTAGTCTTCACTGGCACGTCAAGTAGTAGAATTCGAGCATGGAAGCAACCAGACTGCATGGAGCGAGGATATCTCAAATCCAGTTCAGGCGAAGTCCGAGCAATTTTAGCTTATGGTAACACACTTTTCTCTGCTCACAAAGATAACAGAATTCGAATCTGGAGCTTCACTGTTGCAGACACCTTCAGGTCCAAGAAATTGTCCACTCTCCCAAGAAGAAGTCCGTTCCCCTTGTTCGCAAGAACAAACAACTTTCAGCACAAAGATTTTGTCTCTTGCTTGGCATATTATCATGCAGATGGGCTGCTGTACACTGGTTCCCATGACAGAACTGTTAAAGCTTGGCGCGTTTCTGATGGAAAATGTGTTGACTCGTTTGCAGCACATGAAGATTACATCAATGCAATAATGGTGAACCAAGATGATGGGTGCGTTTTCACTTGCTCCTCTGATGCTTCGGTGAAAATATGGAGGAGGATATATAGAGAAAACTCTCACACTCTCACTCTCACTCTTAGATTCCAATCATCACCAATCAACGCAATGGCATTGAGCTCAGCTTTCAATAATTGCTTCCTCTATGCTGGTTGTTCTGATGGGGTTATAAATTTCTGGGCAAAAGACAAATCAACCTACAGGTTTCAGCATGGAGGGTTTCTGCAAGGCCACCGTTTTGCTGTTCTGTGCATGACTGCCGTCGGAAAATTGATACTCAGTGGGTCCGAGGACACGACAATACGAGTGTGGAGGAGAGTTGAAGGTGGTTGCTACCATGAATTCTTAGCTTTGTTAGATGGGCATAGAGGACCCGTGAGATGCTTGGCTGCTTGTCTTGAGATGGAGAAGGTTGTGATGGGTTTTCTTGTGTATAGTGCAAGCATGGACCAGACTTTTAAGGTTTGGAGACTTAAAGTTTTGCCTGATGACACAATGTGGTCGGAATACAAAGATCGGCAGCAACTTTCAAGGACTAAGAGTGGTATGGACTATGATACAAGTCCTGTCTTGTCTCCTTCCTGGGTGGAGAAGAAACTTCAAGGAGACCAGTTTCAATGA 1374 0.4505 MEFYGRKPLRSFINEEEKTRQSPNPCVPSHEETREEDLQDMQFSPAMPSSPDGRPSVTASLPRPSSPGSPWTLSPRQPPPSSLLYHCIASLHRHEGNVYAITFSKGLVFTGTSSSRIRAWKQPDCMERGYLKSSSGEVRAILAYGNTLFSAHKDNRIRIWSFTVADTFRSKKLSTLPRRSPFPLFARTNNFQHKDFVSCLAYYHADGLLYTGSHDRTVKAWRVSDGKCVDSFAAHEDYINAIMVNQDDGCVFTCSSDASVKIWRRIYRENSHTLTLTLRFQSSPINAMALSSAFNNCFLYAGCSDGVINFWAKDKSTYRFQHGGFLQGHRFAVLCMTAVGKLILSGSEDTTIRVWRRVEGGCYHEFLALLDGHRGPVRCLAACLEMEKVVMGFLVYSASMDQTFKVWRLKVLPDDTMWSEYKDRQQLSRTKSGMDYDTSPVLSPSWVEKKLQGDQFQ* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01671 457 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 190 227 - -
Pte1g01671 457 MobiDBLite consensus disorder prediction 1 17 - -
Pte1g01671 457 MobiDBLite consensus disorder prediction 43 67 - -
Pte1g01671 457 PRINTS G protein beta WD-40 repeat signature 148 162 IPR020472 -
Pte1g01671 457 PRINTS G protein beta WD-40 repeat signature 209 223 IPR020472 -
Pte1g01671 457 PRINTS G protein beta WD-40 repeat signature 343 357 IPR020472 -
Pte1g01671 457 CDD WD40 87 408 - -
Pte1g01671 457 Pfam WD domain, G-beta repeat 324 355 IPR001680 GO:0005515
Pte1g01671 457 Pfam WD domain, G-beta repeat 193 221 IPR001680 GO:0005515
Pte1g01671 457 Pfam WD domain, G-beta repeat 226 263 IPR001680 GO:0005515
Pte1g01671 457 Gene3D - 71 172 IPR015943 GO:0005515
Pte1g01671 457 ProSiteProfiles Trp-Asp (WD) repeats profile. 232 263 IPR001680 GO:0005515
Pte1g01671 457 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 65 410 IPR045182 -
Pte1g01671 457 MobiDBLite consensus disorder prediction 1 75 - -
Pte1g01671 457 SUPERFAMILY WD40 repeat-like 86 410 IPR036322 GO:0005515
Pte1g01671 457 Gene3D - 173 264 IPR015943 GO:0005515
Pte1g01671 457 ProSiteProfiles Trp-Asp (WD) repeats profile. 326 355 IPR001680 GO:0005515
Pte1g01671 457 ProSiteProfiles Trp-Asp (WD) repeats profile. 190 231 IPR001680 GO:0005515
Pte1g01671 457 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 232 263 - -
Pte1g01671 457 SMART WD40_4 84 121 IPR001680 GO:0005515
Pte1g01671 457 SMART WD40_4 271 312 IPR001680 GO:0005515
Pte1g01671 457 SMART WD40_4 319 356 IPR001680 GO:0005515
Pte1g01671 457 SMART WD40_4 124 161 IPR001680 GO:0005515
Pte1g01671 457 SMART WD40_4 363 408 IPR001680 GO:0005515
Pte1g01671 457 SMART WD40_4 184 222 IPR001680 GO:0005515
Pte1g01671 457 SMART WD40_4 225 264 IPR001680 GO:0005515
Pte1g01671 457 Gene3D - 265 446 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01671 Pte-Chr1 38262657 38264030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01671 193 412 Miscellaneous Gene Families AT5G08390 24.887 6.46e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01671 - - qsa:O6P43_015506 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01671 1 38262657 38264030 Pte1g01671 1 38262657 38264030 RCT