Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01660 ATGGTGAATATTATGGTGGAACGAGCCACGAGCGATATGCTCATAGGTCCTGATTGGGCAATGAACCTTGAGATCTGTGACATGCTCAACCGTGACCCTGGGCTGGCAAAGGATGTAGTTAAAGGTATAAAGAAGCGGATTGGAAGTAGAAATCCAAAAGTTCAACTTCTTGCTCTTACCCTTTTGGAGACAATCATAAAGAATTGTGGAGACATAGTTCACATGCATGTAGCAGAGAAAGATGTTCTTCACGAGATGGTGAAAATTGTTAAAAAAAAGCAACCTGACTTTCACGTGAAGGAGAAGGTTCTTATTCTAATAGACACTTGGCAAGAGGCTTTTGGGGGACCAAGGTCAAGATATCCTCAGTATTATGCAGCTTACCAGGAACTGTTGCGTGCTGGAGCTGTGTTCCCTCAGGGGTCTGAACAATCTGCACCAGTATTTACACCTCCACAAACACAACCACTGTCGTCGTACCCACCCAATGTGCGAAATACAGAGCCCCGACTAGACAGAGCAGAGACTTCTGCAGAATCTGAGTTTCCCACTCTGAGTTTGAATGAAATCCAAAATGCACGTGGTGTTACAGATGTGCTTGCAGAGATGCTTAATGCACTAGATCCAACAAACAAAGAGGGACTCGGACAGGAGGTTATCATTGATTTGGTGGAACAATGTCGTACATACAAGCAGAGAGTGGTGCACCTTGTCAATTCAACATCTGACGAATCACTGTTGTGTCAAGGACTTGCACTGAATGATGACCTGCAGCGGGTGCTAGCCAGGCATGAAGCCATTGCTTCAGGAGCATCTATTGAAAGCCAACTGGATAAAAATAATCCTAATTCTACAAGAGCGCTTGTTGATTCCAATAGTCCTCTGGTCGACACTGGTGAAAGCAGCAACAAATCTCAGAAGAGTTCTGCTTCAAATGCTGGTGCCTCGGATCACCCATTTAATCAGTTACTGCTTCCTGCACCTCCTACAACAAATAGCTCAGCCCCTGCTACAGTGGACCCTAAAATGGACTTGCTGAGTGGTGATGACTATAGCTCACCAAAGGCAGAGACTTCGCTTGCTCTTGTTCCTGTAGGAGAACAAAAGCCAGCCAGTCCTATGTCTCAGCAAAATGCCATTGTTCTTTTTGATATGTTTGCAGATAGTAACAATGCAACCAGTTCTACTGATACCCAGCCAACAAATCATGCTGGCCAAATTAGTTCTGCGGGACCTCAATTTCAACAGCAGCAGAGTTTTGTATCGCCCCAAGTCTCCTTTGGAGTTATTTTTGGCAATCTGGTAGCTAATGTGTGGGGGAAAGAAATTGATGTTGGCTACATTTATTTGGTGGTTGCAGGAGTTGAAAGCACTGGGTCGTTTCCACCTCCACCTTGGGAAACTCAGCCATCTGATAATAGTCCCCTGGTAGCAGGCTCACAATATCCACAGTCTCTGCAACTTGCTCAGATGGTTCTGATGCATGCACAGACAAGTACGCAGCCTCAAGTGCCTCAACCAATGGGGAACGATCATGTGGTTGGGATGTACATTCAGCCAATCACAAATGGCCATCTCTCTGCAATCAATAACCAAGTTGCCCCTATCAATCAACTGGGCTTCCCCCCTCAGCCAATGCAAGCACTTCCAGGACCATATGTGGGGATGATGCCACAGCAGGTACAAGCTGGCTCTGTTGCCTCGATGTATCCTCAACAAATGTATAGCAATCAATTCATGGGATATGGATATGCACATGGATATGGTCATCAACAAGGGGCGCACTACCTTCAACAAAGATTGAATGGCCTGTCCCTCAATGACAATGCTTTGAGGAACTCCTACCAGATTTCTAGCTCGTCATATGCGCCATCTGCTAAGCCTTCCAAGCCAGAGGATAAGCTTTTCGGAGACCTTGTCGATATGGCTAAAGTGAAACCAAAACCCACTCCAGGATAA 1959 0.4574 MVNIMVERATSDMLIGPDWAMNLEICDMLNRDPGLAKDVVKGIKKRIGSRNPKVQLLALTLLETIIKNCGDIVHMHVAEKDVLHEMVKIVKKKQPDFHVKEKVLILIDTWQEAFGGPRSRYPQYYAAYQELLRAGAVFPQGSEQSAPVFTPPQTQPLSSYPPNVRNTEPRLDRAETSAESEFPTLSLNEIQNARGVTDVLAEMLNALDPTNKEGLGQEVIIDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLARHEAIASGASIESQLDKNNPNSTRALVDSNSPLVDTGESSNKSQKSSASNAGASDHPFNQLLLPAPPTTNSSAPATVDPKMDLLSGDDYSSPKAETSLALVPVGEQKPASPMSQQNAIVLFDMFADSNNATSSTDTQPTNHAGQISSAGPQFQQQQSFVSPQVSFGVIFGNLVANVWGKEIDVGYIYLVVAGVESTGSFPPPPWETQPSDNSPLVAGSQYPQSLQLAQMVLMHAQTSTQPQVPQPMGNDHVVGMYIQPITNGHLSAINNQVAPINQLGFPPQPMQALPGPYVGMMPQQVQAGSVASMYPQQMYSNQFMGYGYAHGYGHQQGAHYLQQRLNGLSLNDNALRNSYQISSSSYAPSAKPSKPEDKLFGDLVDMAKVKPKPTPG* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01660 652 MobiDBLite consensus disorder prediction 143 165 - -
Pte1g01660 652 MobiDBLite consensus disorder prediction 143 170 - -
Pte1g01660 652 MobiDBLite consensus disorder prediction 273 318 - -
Pte1g01660 652 Pfam GAT domain 197 269 IPR004152 GO:0035091|GO:0043130
Pte1g01660 652 Pfam VHS domain 5 131 IPR002014 GO:0035091|GO:0043130
Pte1g01660 652 SMART VHS_2 2 135 IPR002014 GO:0035091|GO:0043130
Pte1g01660 652 FunFam TOM1-like protein 2 1 149 - -
Pte1g01660 652 SUPERFAMILY GAT-like domain 143 270 - -
Pte1g01660 652 Gene3D - 184 276 IPR038425 -
Pte1g01660 652 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Pte1g01660 652 Gene3D - 1 139 IPR008942 -
Pte1g01660 652 ProSiteProfiles VHS domain profile. 9 139 IPR002014 GO:0035091|GO:0043130
Pte1g01660 652 PANTHER TOM1-LIKE PROTEIN 1 648 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pte1g01660 652 MobiDBLite consensus disorder prediction 618 652 - -
Pte1g01660 652 MobiDBLite consensus disorder prediction 391 415 - -
Pte1g01660 652 MobiDBLite consensus disorder prediction 273 352 - -
Pte1g01660 652 ProSiteProfiles GAT domain profile. 181 269 IPR004152 GO:0035091|GO:0043130
Pte1g01660 652 CDD VHS 5 133 - -
Pte1g01660 652 CDD GAT_GGA-like_plant 189 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01660 Pte-Chr1 38194375 38200839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01660 - - mnt:21390666 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01660 1 38194375 38200839 Pte1g01660 1 38194375 38200839 RCT