Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01398 ATGGGGATCCCTGTCCTCTTACATGCTCTGCTTTTCTCTCTGTTTCTGTTTTATCACCATACAAAAGCAGATGACTTGGATTCCTCCTTCAGTAATATTACTAACTTCAATGTTAGAAAGCTTGCAGGTAAATGCAATTGGTTCCGTGGTCAATGGGTTTACGACAATTCTTATCCTCTCTATGACTCTTCTTCCTGTCCCTTCATCGATCCACAGTTCGATTGCCAAAAGTATGGCCGCCCTGATAAAGCTTACCTCAAATTCAGATGGCAGCCATTCTCTTGTCCCTTACCAAGGTTCAATGGATTGAGATTCTTAGAGAGATGGAGAGGGAAGAAGATCATGTTTGTTGGAGATTCACTGAGTTTGAACCAGTTTCAATCTTTAGCTTGTATGATCCACGCATGGGTGCCCAATACTAAGACAACCTACATGAAGAAAGACGCCCTCTCTTCAGTGACATTTGAGAACTTTGGACTTAAGCTATTGCTGTACCGTACACCCTACCTAGTAGATCTTGCTTACGAGAAGATCGGACGGATTTTGAAGATTGATTCAATCCAAAATGGCAATGCATGGAGAGGAATGGACGTGCTGGTCTTCAACACGTGGCACTGGTGGACCCACACCGGAAGTTCACAGCCATGGGATTTCATACAAGAGGGGAACAAAATCTACAAAGATATGAATCGTTATATCTTATTTTACAAAGGATTGACCACTTGGAGTAGATGGGTCAATCTGAATGTAGATCCCACCAAAACAAAGGTCTTCTTTCTTGGAATTTCCCCAGTACATTACCAGGGCAAGGATTGGAATCAACCAACAAGATCATGTGCTGCTGAAACACGACCATTCCTTTATCAGAGGTATCCAGCAGGAACACCAATGGCTTGGGTAGTTGTGAACAAGGTTTTGAGTAGGATTAAGAAACCAGTGACTTTCTTAGACGTGACAACACTCTCTCAATACAGAAAAGATGCACACCCTTCAGCATACAGTGGTGAACACAGTGGCACAGATTGCAGTCACTGGTGTCTTCCAGGCCTGCCTGATACTTGGAATGAACTCCTATATGCTTCTCTCTAA 1089 0.4307 MGIPVLLHALLFSLFLFYHHTKADDLDSSFSNITNFNVRKLAGKCNWFRGQWVYDNSYPLYDSSSCPFIDPQFDCQKYGRPDKAYLKFRWQPFSCPLPRFNGLRFLERWRGKKIMFVGDSLSLNQFQSLACMIHAWVPNTKTTYMKKDALSSVTFENFGLKLLLYRTPYLVDLAYEKIGRILKIDSIQNGNAWRGMDVLVFNTWHWWTHTGSSQPWDFIQEGNKIYKDMNRYILFYKGLTTWSRWVNLNVDPTKTKVFFLGISPVHYQGKDWNQPTRSCAAETRPFLYQRYPAGTPMAWVVVNKVLSRIKKPVTFLDVTTLSQYRKDAHPSAYSGEHSGTDCSHWCLPGLPDTWNELLYASL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01398 362 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 97 360 IPR026057 GO:0016740
Pte1g01398 362 Pfam PMR5 N terminal Domain 44 95 IPR025846 -
Pte1g01398 362 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 358 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01398 Pte-Chr1 35550659 35553541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01398 - - qsa:O6P43_000808 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01398 1 35550659 35553541 Pte1g01398 1 35550659 35553541 RCT
Pte1g01398 1 35550659 35553541 Pte19g01008 19 9292694 9295010 RCT
Pte1g01398 1 35550659 35553541 Pte2g00880 2 8104508 8108116 RCT
Pte19g01008 19 9292694 9295010 Pte1g01398 1 35550659 35553541 RCT
Pte2g00880 2 8104508 8108116 Pte1g01398 1 35550659 35553541 RCT
Pte17g00434 17 5675452 5676108 Pte1g01398 1 35550659 35553541 RCT