Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01052 ATGGAACTGAATGAAAGGAGTGAGCACAAAAGCAAGTTTAAAACAATATGCGTCTTTTGTGGTAGTAAAGCTGGGTACAAGCCTGCATTTGGTGATGCTGCTCTTAATCTCGGTAAACTGCTGGTTGAGAGAAAGATTAATTTGGTGTATGGAGGAGGTAGTGGCGGTCTAATGGGGTTGATATCTCAGACTGTACTGAATGGAGGCTGCCATGTTCTTGGAGTGATACCTAAAGCTCTTTTACCTCGCGAGATTTCAGGAGAAACATTTGGAGAAATAAAAACTGTTTCAGACATGCATGAAAGAAAGTCAGAAATGGAGAAACATGCTGATGCATTCATAGCACTTCCTGGAGGTTATGGAACGATGGAAGAACTTCTGGAAATGATAACATGGTCTCAGCTAGGAATACATGATAAACCAGTGGGGTTGTTAAATGTAGAGGGATACTTCGACTGCTTACTAGCCCTATTTGATAAGGGTGTGGAAGAAGGTTTCATAAACAATTCAGCCAGGCATATCGTGATCATGGCGGATACAGCAGAAGAGCTAATAAGCAAAATGGAGGAGTATGCTCCCCTCCATGAAAAGGTGGCATCCAAACAAAGTTGGGAAGTGGACCAATACCAATTGTTAGAAGCTGAAACAAGTAATCAGATGGATCCAACATATTGA 675 0.4163 MELNERSEHKSKFKTICVFCGSKAGYKPAFGDAALNLGKLLVERKINLVYGGGSGGLMGLISQTVLNGGCHVLGVIPKALLPREISGETFGEIKTVSDMHERKSEMEKHADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGLLNVEGYFDCLLALFDKGVEEGFINNSARHIVIMADTAEELISKMEEYAPLHEKVASKQSWEVDQYQLLEAETSNQMDPTY* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01052 224 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 13 207 - -
Pte1g01052 224 Pfam Possible lysine decarboxylase 58 188 IPR031100 -
Pte1g01052 224 Gene3D - 12 207 - -
Pte1g01052 224 NCBIfam Rossman fold protein, TIGR00730 family 14 191 IPR005269 GO:0009691|GO:0016787
Pte1g01052 224 PANTHER LOG FAMILY PROTEIN YJL055W 7 211 - -
Pte1g01052 224 SUPERFAMILY MCP/YpsA-like 12 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01052 Pte-Chr1 27418132 27419544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01052 K22522 - nnu:104597397 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01052 1 27418132 27419544 Pte1g01052 1 27418132 27419544 RCT