Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00967 ATGTCTTCCAAAGAGAAAATGAGATACCAACCAGTTAGCTTCCTCGCAGAAGACAAAGTTGTATTCTTAAGGGGCTTCATGATTTCATTTCTCAGTTGTTGTTTAATTATCCCAATGAACTTCAGCTATTCCAGAGTCCCTGCTTCCCTGTCAACACTTACTCTTGAAGGACATCTAGTTTTTGATGCAGTAAGCCATGCAGCCAGAGATTTTGGTAACAGGATCGAATATCAACCTCTGGCAGTACTGAATCCAAAATCAGTATCTGATATAGCAGCAACAGTTAAGCATGTCTGGAACATGGGTCCTAGTTCCCAGCTTACGATTGCAGCACGAGGCCATGGTCACTCCCTCCAGGGACAGTCACAAGCCCATGGAGGAATTGTGATCAACATGGAATCATTGAAGGACCGTCCAATGTATGTCTCTACTGAGAATTCTCCATATGTTGATGTCTCAGGTGGAGAATTGTGGATTAACATTCTACATGAGAGTCTGAAATATGGTTTAGCACCAAGATCATGGACAGACTACTTACATCTAACAGTAGGTGGTACACTGTCCAATGCAGGAATAAGTGGACAGGCATTTCGACATGGTCCACAAATCAGTAATGTTCAACAGCTAGAGGTTGTCACAGGAAAAGGGGAGGTTGCAAACTGTTCAGCGGACCACAATGGCGAGCTCTTTCATAGCGTTCTTGGAGGTCTAGGTCAATTTGGGATCATAACTCGTGCAAGAATAGTGTTGGAACCAGCACCGTCCATGGTGAAATGGATTAGAGTGCTGTACACAGATTTTACAAAATTTACAAGAGATCAGGAGCACTTAATATCAGTTGAAAGAACATTTGATTATATTGAAGGATTTGTGATAGTAAACAGAACCGGTCTGCTGAATAACTGGAGATCATCTTTCAACCCGCAAGACCCAGTTCAAGCCAGCCAGTTCAACTCAGATGGAAAAACTCTTTTCTGCTTAGAGTTGGCCAAATATTTCAACCTGGATGACGCAAATGTTGTAGAGAGGGAAGTCAATCACTTACTGTCCCACTTGAATTACATCCCATCAACGCTTTTTCTATCAGAAGTCACATACTTGGAATTTTTGGACAGAGTTCACATTTCTGAGATAAAATTACGGTCAAAGGGCTTGTGGGATGTTCCTCACCCGTGGCTCAATCTCCTCGTACCAAAAAGTAAAATATATGCTTTTGCTGGAGAAGTCTTTGGCAATATCCTTGCACAGACAAGCAATGGCCCTGTACTTATTTACCCAGTAAACAAATCCAGGTGGGACAGCAGAACTTCTATAGTTATTCCTGAGGAAGATATTTTTTATTTGGTTGCATTTCTTACCTCCGCTATTCCCTTTTCCACTGGTCCCGATGGGCTAGAACACATTTTGACTCAGAACAAAAGAATACTGGAATTTTGTGAAACGGCTCATCTTGGGGTCAAGCAGTATCTTCCTTACTATACTGACCAGGAACACTGGAGAGCTCACTTCGGGTCAAAGTGGGAGTCTTTTCTGAAGAGGAAATCTACTTATGACCCATTGGCAATACTCAATCCAGGCCAAAGAATATTTCAAAAAACACCATCCCTCCCATTACAGCAGCCGCAAACAATCAATATGCAAAAGCAGCCCTTATGA 1656 0.4221 MSSKEKMRYQPVSFLAEDKVVFLRGFMISFLSCCLIIPMNFSYSRVPASLSTLTLEGHLVFDAVSHAARDFGNRIEYQPLAVLNPKSVSDIAATVKHVWNMGPSSQLTIAARGHGHSLQGQSQAHGGIVINMESLKDRPMYVSTENSPYVDVSGGELWINILHESLKYGLAPRSWTDYLHLTVGGTLSNAGISGQAFRHGPQISNVQQLEVVTGKGEVANCSADHNGELFHSVLGGLGQFGIITRARIVLEPAPSMVKWIRVLYTDFTKFTRDQEHLISVERTFDYIEGFVIVNRTGLLNNWRSSFNPQDPVQASQFNSDGKTLFCLELAKYFNLDDANVVEREVNHLLSHLNYIPSTLFLSEVTYLEFLDRVHISEIKLRSKGLWDVPHPWLNLLVPKSKIYAFAGEVFGNILAQTSNGPVLIYPVNKSRWDSRTSIVIPEEDIFYLVAFLTSAIPFSTGPDGLEHILTQNKRILEFCETAHLGVKQYLPYYTDQEHWRAHFGSKWESFLKRKSTYDPLAILNPGQRIFQKTPSLPLQQPQTINMQKQPL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00967 551 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 79 114 IPR006093 GO:0016491
Pte1g00967 551 Gene3D - 256 489 IPR016170 -
Pte1g00967 551 Gene3D - 132 255 IPR016169 -
Pte1g00967 551 SUPERFAMILY FAD-linked oxidases, C-terminal domain 254 530 IPR016164 GO:0003824|GO:0050660
Pte1g00967 551 PANTHER GULONOLACTONE OXIDASE 26 531 - -
Pte1g00967 551 FunFam Cytokinin dehydrogenase 2 256 489 - -
Pte1g00967 551 Pfam FAD binding domain 79 222 IPR006094 GO:0050660
Pte1g00967 551 Gene3D - 64 530 IPR016167 -
Pte1g00967 551 ProSiteProfiles PCMH-type FAD-binding domain profile. 75 253 IPR016166 GO:0071949
Pte1g00967 551 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 254 530 IPR015345 GO:0009690|GO:0019139|GO:0050660
Pte1g00967 551 SUPERFAMILY FAD-binding/transporter-associated domain-like 65 252 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00967 Pte-Chr1 20626370 20629234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00967 K00279 - qsa:O6P43_029631 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00967 1 20626370 20629234 Pte1g00967 1 20626370 20629234 RCT