Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00574 ATGGCTAAAGTAGGTGCTCCAAGATCTACATTTAGTACTTTGCATGTCAACTGTGGAAGAACTACAATACCCGTGGCTAGAGCATCAACAATAAATTTTGGGGCATTCAAGCCAAAATTTGGTCATAATGTGTTCAGAACTTTGAAGCAGGTGGATGGACTGCATGGTGTAAAATTTTCAAAAGCTGCAGCCAGACAATCAAGGAAGAAGGAATACAGAACCCGCGATGGAAAGCATACAGGCACCATTGTCTGTGGGATGACTATAATTTTCATTGCTACAGAAGCTGCTCCATGGAGCAAAACTGGGGGACTGGGAGATGTTCTTGGTGGTCTGCCACCAGCATTAGCAGCATTCGGACATCGAGTAATGACAATTGTTCCTCGGTATGATCAGTACAGAGATGCATGGGATACTGGAGTGATAGTTGAGGTAAAAGTAAGAGACAAGATTGAGAAAGTGCGGTTCTTCCATTGCTACAAAAGAGGCGTTGATCGTATTTTTGTGGATCATCCTTCATTTCTTGAGAAGGTGTGGGGGAAAACTGGAACCAAAATCTACGGACCATTTACTGGAGAAGATTATGAAGATAATCAACTTCGGTTCAGCTTGTTTTGTCAGGCAGCTTTGGAGGCACCCAGAGTTCTGAATCTAACCAATAAGTATTTCTCTGGACCATATGGTGAAAATGTCATTTTCGTTGCCAATGATTGGCACACCGCCTTACTTCCCTGCTACTTGAAATCTATGTATCAGCGCCATGGCATCTACTTAAATGCCCGAGTTGCTTTCTGTATTCACAACATAGCTTACCAAGGGAGATTTGCATATGCTGATTTTGCACTTCTCAATCTCCCAGAGGAATTTCGGAACTCTTTTGACTTCATGGACGGGTACAATAAACCGGTAAAGGGTAGGAAAATCAATTGGATGAAAGCTGCAATTATAGAATCACACTTGATCTTAACCGTTAGCCCATATTATGCCAAAGAACTTCTTTCTGGTGTTGAGAGGGGAGTAGAGTTAGACATCGTACTCCGTCGATACATCCTCATTGGCATTGTGAATGGAATGGATGTTCAAGAATGGAATCCATCCACTGACAAATATTTAAGTGTCAAATATGATTCTTCAACTGTTACGTCAGCGAAACCCCTTCTGAAGGAAGCCCTCCAAGCAGAAGTAGGATTGCCAGTTAGAAAAGATGCCCCAGTCATAGGTTTTATAGGTAGGCTGGAAGAGCAAAAAGGTTCTGACATTCTTGCAGCAGCTATTCCTCAGTTTATCTCAGAAGACGTTCAAATTATAGTCCTAGGGACAGGTAAAAAAGCGATGGAACAACAGCTGGAACAACTGGAGGAGTTGTACCCTGAAAAGGCTAGAGGAGTTGCAAAGTTCAATGTACCCTTAGCCCATATGATTATAGCAGGAGCAGACTTTTTGCTGGTTCCTAGCAGATTTGAGCCTTGTGGTCTCATTCAATTACAAGCCATGCGCTATGGAACTGTACCAATTGTTTCATCAACTGGAGGGTTAGTGGACACTGTCAAAGAAGGTTTCACAGGATTTCAGATGGGTGCTTTTAATGTTGAATGTGATGCTGTCGATCCTGCTGACGTTACAGCTATTGCAACAACTGTGAAGAGGGCCCTTGGAGCATATAGAACTGCAGCTTTCGCCGAAATGATAAAGAACTGCATGGCTCAAGATCTTTCATGGAAGGGACCAGCTAAGAAATGGGAAGAAGTACTGCTGGGATTAGGGGTTGCTGGCAATGAATCAGGAACTGAAGGGGAAGAAATGAATCCACTTGCAAAGGAAAATGTTGCAACTCCTTAA 1839 0.4285 MAKVGAPRSTFSTLHVNCGRTTIPVARASTINFGAFKPKFGHNVFRTLKQVDGLHGVKFSKAAARQSRKKEYRTRDGKHTGTIVCGMTIIFIATEAAPWSKTGGLGDVLGGLPPALAAFGHRVMTIVPRYDQYRDAWDTGVIVEVKVRDKIEKVRFFHCYKRGVDRIFVDHPSFLEKVWGKTGTKIYGPFTGEDYEDNQLRFSLFCQAALEAPRVLNLTNKYFSGPYGENVIFVANDWHTALLPCYLKSMYQRHGIYLNARVAFCIHNIAYQGRFAYADFALLNLPEEFRNSFDFMDGYNKPVKGRKINWMKAAIIESHLILTVSPYYAKELLSGVERGVELDIVLRRYILIGIVNGMDVQEWNPSTDKYLSVKYDSSTVTSAKPLLKEALQAEVGLPVRKDAPVIGFIGRLEEQKGSDILAAAIPQFISEDVQIIVLGTGKKAMEQQLEQLEELYPEKARGVAKFNVPLAHMIIAGADFLLVPSRFEPCGLIQLQAMRYGTVPIVSSTGGLVDTVKEGFTGFQMGAFNVECDAVDPADVTAIATTVKRALGAYRTAAFAEMIKNCMAQDLSWKGPAKKWEEVLLGLGVAGNESGTEGEEMNPLAKENVATP* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00574 612 Gene3D Glycogen Phosphorylase B; 359 569 - -
Pte1g00574 612 FunFam Starch synthase, chloroplastic/amyloplastic 364 569 - -
Pte1g00574 612 Pfam Glycosyl transferases group 1 399 524 IPR001296 GO:0016757
Pte1g00574 612 FunFam Starch synthase, chloroplastic/amyloplastic 88 363 - -
Pte1g00574 612 Pfam Starch synthase catalytic domain 89 347 IPR013534 -
Pte1g00574 612 CDD GT5_Glycogen_synthase_DULL1-like 89 583 - -
Pte1g00574 612 Gene3D Glycogen Phosphorylase B; 89 578 - -
Pte1g00574 612 MobiDBLite consensus disorder prediction 591 612 - -
Pte1g00574 612 Hamap Glycogen synthase [glgA]. 87 587 IPR011835 GO:0004373
Pte1g00574 612 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 64 591 - -
Pte1g00574 612 NCBIfam glycogen/starch synthase, ADP-glucose type 87 584 IPR011835 GO:0004373
Pte1g00574 612 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 84 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00574 Pte-Chr1 7311064 7314500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00574 81 613 Glycosyltransferase AT1G32900 75.000 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00574 K13679 - qsu:112008531 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00574 1 7311064 7314500 Pte1g00574 1 7311064 7314500 RCT