Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01136 ATGGCTACGCTTCAGACTTGGCGAAAAGCCTATGGGGCTCTCAAAGACTCCACCAAAGTCGGCCTTGCTCATGTCAATAGCGACTATGCGGATTTGGATGTTGCTATTGTTAAGGCTACGAACCACGTTGAATGTCCACCCAAAGAAAGGCATCTTAGAAAAATTCTAATTGCCACGTCCGCAATTCGACCAAGGGCTGACGTTGCTTACTGCATCCATGCTCTTGCCCGACGATTGTCCAAGACACGTAATTGGACGGTGGCACTAAAAACTGTTGTAGTAATTCATCGTTTGCTGAGAGAGGGTAATCCTACCTTTCGGGAAGAACTTTTGAACTTCTCACAAAGAGGGCGCATTCTCCAACTTTCCAATTTCAAGGATGATTCAAGTCCCGTTGCTTGGGATTGTTCTGCTTGGGTACGTACATATGCATTGTTTTTGGAAGATAGACTTGAATGCTTTAGGACTCTGAAGTATGACATTGAAGCTGAGAGATTACCCAAGCCTTCCCAAGGTGAAGAGAAGGGTTACAGTAGGACAAGAGATTTGGAGAGTGAAGAATTGTTGGTCCAGTTGCCTGCTTTACAGCACCTGTTATTTCGTCTTATTAGCTGCCGGCCTGAGGGAGCAGCTGTCAGCAATTATGTCATCCAATATGCATTGGCACTGGTCCTTAAGGAGAGCTTTAAGATATATTGTGCAATTAATGATGGAATCATTAATCTTGTAGATAAGTTCTTTGATATGCCAAGACATGAAGCTGTCAAAGGCCTTGATATCTATAAACGTGCAGGTCAACAGGCTGCAGGCCTTTCTGATTTTTATGAAGTTTGCAGAGGATTGGAACTTGCTAGAAATTTCCAGTTTCCCCTTTTAAAAGAGCCTCCACAATCTTTTCTTACAACTATGGAAGAGTACATAAACGAGGTTCCAAGTGTAGTTATGCCAAGTGAACCTGTGCTTCAGCTGACGTACAGGCCAGAAGAAGCTTCTTCAAGTGAAGAGATCAAAGATGAAGAGTGTGAACATGAGCCACCAGTAACTGTTGATGAGATTGTCACCTCAAATCTAGAGGTCGCTCCACCTCCTGCACCTCAAAACTTATTTGAAACTGGAGATTTACTGGGTTTGAATGATGCTGTGCCCGTTTTATCCTCCATTGAGGAAAACAATGCTTCAACTCTAGCCATTGTTCCAACCAAGACTGGGGCTACACCAACGATTAGTGCAAGTGGTTCCCAAACGAAAGATTTCGATCCAACTGGATGGGAGCTTGCCCTGGTCACCACTCCAAGTGCTGACATTTCTTCAGTTAATGAGAGACAACTCGCTGGTGGATTGGACTCCCTTACTCTGAACAGTTTATATGATGAGGCAGCTTACAGAGCGGCATCGCCACCTGCAAATGGATCAGCTGCACAAAATCCATTTGAGGTCCAAGATCTATTTGCTTTATCAAACAGTGTTCCTCCTCCTCCTGCTGTGCAGATGGCCGTGGTCGATTCACCACAGGCTAACCCATTTGACTCATACCAACCTTATCAGCCACAGCTTCAGCAGCAGCATATGATGATCAGCCCTGCCAATCCATTTGGCGATGCAGGTTTTGGGGGATTTCCCGCGAATCCTGTTTTTCACCCTCAGAATAACAATCCATTTGGAAGCCCGGGTTTGATATGA 1680 0.4488 MATLQTWRKAYGALKDSTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILIATSAIRPRADVAYCIHALARRLSKTRNWTVALKTVVVIHRLLREGNPTFREELLNFSQRGRILQLSNFKDDSSPVAWDCSAWVRTYALFLEDRLECFRTLKYDIEAERLPKPSQGEEKGYSRTRDLESEELLVQLPALQHLLFRLISCRPEGAAVSNYVIQYALALVLKESFKIYCAINDGIINLVDKFFDMPRHEAVKGLDIYKRAGQQAAGLSDFYEVCRGLELARNFQFPLLKEPPQSFLTTMEEYINEVPSVVMPSEPVLQLTYRPEEASSSEEIKDEECEHEPPVTVDEIVTSNLEVAPPPAPQNLFETGDLLGLNDAVPVLSSIEENNASTLAIVPTKTGATPTISASGSQTKDFDPTGWELALVTTPSADISSVNERQLAGGLDSLTLNSLYDEAAYRAASPPANGSAAQNPFEVQDLFALSNSVPPPPAVQMAVVDSPQANPFDSYQPYQPQLQQQHMMISPANPFGDAGFGGFPANPVFHPQNNNPFGSPGLI* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01136 559 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Pte19g01136 559 FunFam Clathrin assembly protein AP180 6 161 - -
Pte19g01136 559 SUPERFAMILY GAT-like domain 178 309 - -
Pte19g01136 559 SMART enth_2 30 161 IPR013809 -
Pte19g01136 559 FunFam Putative clathrin assembly protein 173 320 - -
Pte19g01136 559 CDD ANTH_N 32 154 - -
Pte19g01136 559 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Pte19g01136 559 Gene3D - 7 161 IPR008942 -
Pte19g01136 559 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 503 IPR045192 GO:0048268|GO:0072583
Pte19g01136 559 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Pte19g01136 559 Gene3D ANTH domain 173 319 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01136 Pte-Chr19 14003285 14009505 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01136 - - gmx:100776929 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g01136 19 14003285 14009505 Pte19g01136 19 14003285 14009505 RCT