Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00878 ATGGCATCGAACGGCAAGGTTGTGTTTGAAGATTTCTTCCCGGCAATGATGGAGAAACTTGGCACAGACGGTTTTATGAAGGAGTTAGGGAATGGGTTCGATCTGTTGAAGGATGAACAAAGGGGCGTGATCACATTTACCAGCTTGAAGAGGAATGCAGCATTGCTTGGCCTGGAAGGCATGAGTGATGACGAGATAAGGGCCATGCTAAGGGAAGGTGACTTGGACGGGGATGGAGCTCTGAACGAGAAGGAGTTCTGTACCCTTATGTTTAGATTGAGCCCTGACCTGATGAAAGACTCGGAAGAACTCTTGGACGATGCCATGGCGAGTGACAGTGATGATGATTAG 351 0.4843 MASNGKVVFEDFFPAMMEKLGTDGFMKELGNGFDLLKDEQRGVITFTSLKRNAALLGLEGMSDDEIRAMLREGDLDGDGALNEKEFCTLMFRLSPDLMKDSEELLDDAMASDSDDD* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00878 116 Pfam EF-hand domain pair 41 92 IPR002048 GO:0005509
Pte19g00878 116 PANTHER CALCIUM-BINDING PROTEIN KIC 7 113 IPR044205 GO:0005509
Pte19g00878 116 SUPERFAMILY EF-hand 3 90 IPR011992 -
Pte19g00878 116 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
Pte19g00878 116 SMART efh_1 65 93 IPR002048 GO:0005509
Pte19g00878 116 Gene3D - 7 116 - -
Pte19g00878 116 ProSiteProfiles EF-hand calcium-binding domain profile. 61 96 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00878 Pte-Chr19 7430011 7431057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00878 9 112 EF-hand Containing Proteins AT2G46600 51.923 1.45e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00878 K24345 - egr:104445500 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00878 19 7430011 7431057 Pte19g00878 19 7430011 7431057 RCT