Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00860 ATGGCTGTGGAGTACCGGTGTTGTGAGAGTGAATTTTTCATTCATATAATGGTGATCGTCCTGTTGGTATTGTTTGCTGGCTTGATGTCTGGGCTTACTTTGGGACTGATGTCCTTGAGTCTTGTTGATCTTGAAGTTCTGGCCAAATCTGGTACCCCGAAGGATCGAAAACATGCGGAAAAAATATTGCCTGTTGTCAGAAATCAACATTTACTGCTGGTCACTCTCTTGATCTGCAATGCTGCTTCCATGGAGGCACTCCCCATATTTCTTGACAGTCTGGTCACAGCTTGGGGAGCTATTTTGATATCGGTGACATTGATTCTTCTGTTTGGTGAGATTATTCCTCAATCAGTTTGTTCTCGATATGGTCTTGCAATTGGTGCAACTGTGGCTCCATTTGTTCGTGTTCTTGTTTGGATATGCTTTCCTGTAGCATACCCAATTAGCAAGCTGTTGGACTTCCTGTTAGGTCATGGACATGTTGCTCTTTTTCGCAGAGCTGAACTGAAGACACTTGTAAATTTTCATGGGAATGAGGCTGGAAAAGGTGGAGAACTGACACATGATGAGACAACAATCATCGCTGGGGCACTTGAACTCCATGAGAAGACAGCTGGTGATGCCATGACTCCTATATCTGAAACTTTTGCGGTCGACATCAATTCAAAGTTGGACAGGGAACTGATGAACCTAATATTGGAGAAAGGGCATAGCAGAGTCCCTGTTTATTATGAGGATGCTACAAATATCATTGGAGTTATCTTGGTAAAAAACTTATTGACAATTGACCCTGGAGACGAATTGCCAGTCAAAAGTGTCACCATACGCAGGATTCCAAGAGTTCCAGAAACAATGCCATTGTATGATATATTGAATGAGTTCCAGAAAGGTCACAGTCACATTGCAGTTGTTGTGAGGAATGCGAACAAGGCAGTAGATCAACCCCCTAGCAATTCTGCTAATGGTACAGTGATGGATGTGAGAGTGGATATCGATTGTGATAAGACTCCCCAAGAGAAGGTACTGAAAAAGAAGAGATCGATTCAAAAATGGAAAAGCTTTCCAGTTGCCACAACACATTCGTCTAAAGGGGGTTCTAGGACGAAAAAATGGACGAAAAACATGTACTCCGACATTTTGCAGATTGATGGAAATTCCATTCCTAAAAACCCTGATGAAGAGGAAGCTGTAGGAATTATTACAATGGAAGATGTAATTGAAGAGCTGTTACAGGAGGAGATATTTGATGAAACGGATCACCATTTTGAGGATTCATGA 1281 0.42 MAVEYRCCESEFFIHIMVIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPKDRKHAEKILPVVRNQHLLLVTLLICNAASMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGATVAPFVRVLVWICFPVAYPISKLLDFLLGHGHVALFRRAELKTLVNFHGNEAGKGGELTHDETTIIAGALELHEKTAGDAMTPISETFAVDINSKLDRELMNLILEKGHSRVPVYYEDATNIIGVILVKNLLTIDPGDELPVKSVTIRRIPRVPETMPLYDILNEFQKGHSHIAVVVRNANKAVDQPPSNSANGTVMDVRVDIDCDKTPQEKVLKKKRSIQKWKSFPVATTHSSKGGSRTKKWTKNMYSDILQIDGNSIPKNPDEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00860 426 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Pte19g00860 426 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Pte19g00860 426 PANTHER METAL TRANSPORTER CNNM 3 423 IPR045095 GO:0010960
Pte19g00860 426 Gene3D - 367 418 IPR046342 -
Pte19g00860 426 Gene3D - 191 326 IPR046342 -
Pte19g00860 426 FunFam DUF21 domain-containing protein 189 324 - -
Pte19g00860 426 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Pte19g00860 426 Pfam CBS domain 227 262 IPR000644 -
Pte19g00860 426 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Pte19g00860 426 SUPERFAMILY CBS-domain pair 194 412 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00860 Pte-Chr19 7099169 7103845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00860 K16302 - qsa:O6P43_012482 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00860 19 7099169 7103845 Pte19g00860 19 7099169 7103845 RCT