Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00857 ATGGCTTCATCGGAAATTGAAGTGGATTCATCGAACACAAAAACCCAGAACAATCAACCAGAAATTGCTGTGGTAGACGTATTCTCTGCCTGTGCTTACGGTGATTTGCAGAAATTGAAGACCTTTGTTGAACAAGATGGTGCTTCTTTGCGTTCACCCGATGCTAATGGATATTTTGCTATTCAATGGGCTGCACTCAACAACTATCCTGATATTGTACAATACATCATTGAGCATGGAGGAGATTTAAATGCTGCTGATCATATGCTCCAAACAGCTCTGCATTGGGCGGCAGTTCGAGGTGGGACTGCAGTAGCTGATGTGCTATTGCAGAATGGAGCTCGAGTTGAAGCTGCTGACGCAAACGGTTATCGGGCAGTTCATGTTGCAGCTCAATACGGACAAACAACTTTCTTAAATCATATTGTGGCAAAGTACCATGCTGATTTTGATGCACCTGATGCTGATGGGAGGAGTCCTCTTCATTGGGCTGCATACAAGGGGTTTGCAGATACGATTAGATTGCTCTTATTTCGAGGTGCATCCCAAGAAAGACAAGATAAAGATGGTTGTACTCCATTGCACTGGGCAGCATTAAGAGGTAATCTTGAGGCATGCACTGTACTTGTACATGCAGGCAAAAAGAGGGAATTAGTGGTGAAAGATAAATCTGGATTTATGCCTTTCCAGCTTGCACTAGATAAGGGTCATCAGCATGTTGCTCGTATCCTTTCTAATGCACAACGGGCTCAAAACAATTGTTGGGTTGACAAGGTTTGTGGTGGCAAAATGGCAGATGTTGGTTATGCCCCTATCTTATTTTGTATTATAGTTTTGCAGATTATCCTCTTCATCAATTCAGTTATTCTAGCTCCTAATCTTACAAAGATTACTGCCCTCGTCGGACTTTGGGCATGGGTAGCTGTTTCACTCACTTTCGCTGCATTGATTATGTTCTACAGATGTAGTAGTAAGGATCCTGGTTATATAAAACAGTATCCGGGTAATCACAGTGATGCTGAGGAACTTTTGTTGAACATCGAGACCAACAATTCTGCATGGACAGGGAATTGGTCTCAGTTATGCCCTACTTGCAAGATATTAAGACCAGTTCGATCTAAGCACTGTGCTACTTGTAATCGTTGTGTAGATCAATTTGACCACCACTGCCCTTGGATATCTAATTGTGTAGGGAAGACAAACAAACGTGACTTCTTCATTTTCATCTGTCTAGGAACTTTCACTTCATTCTCCAGTGCCGTCATCACACTTCACAGAATTTGGACATCAATACCGACATCACCATCCCAAGAAACTTTGTTCCATCAATTGGTAGTGCAACATCCTGGGATTATTGCATTTTTGTTTCTGGATATGGTTATTTTCATTGCTGCTACAACTTTGACAACAGCACAGGCCTCTCAGATAGCTCGAAACATCACTACCAATGAATTAGCAAATGCTGTGCGCTATGGATATCTTCGTGGTCCAGATGGGCAGTTTCGTAATCCATATAACCACGGTTGTCGTAAGAACTGTGCAGATTTTCTCATTAATGGCTTTACAGATGACAGTGATATTGCATGGCTTCCATTGCAGCAAGTTGCACATTGA 1614 0.4219 MASSEIEVDSSNTKTQNNQPEIAVVDVFSACAYGDLQKLKTFVEQDGASLRSPDANGYFAIQWAALNNYPDIVQYIIEHGGDLNAADHMLQTALHWAAVRGGTAVADVLLQNGARVEAADANGYRAVHVAAQYGQTTFLNHIVAKYHADFDAPDADGRSPLHWAAYKGFADTIRLLLFRGASQERQDKDGCTPLHWAALRGNLEACTVLVHAGKKRELVVKDKSGFMPFQLALDKGHQHVARILSNAQRAQNNCWVDKVCGGKMADVGYAPILFCIIVLQIILFINSVILAPNLTKITALVGLWAWVAVSLTFAALIMFYRCSSKDPGYIKQYPGNHSDAEELLLNIETNNSAWTGNWSQLCPTCKILRPVRSKHCATCNRCVDQFDHHCPWISNCVGKTNKRDFFIFICLGTFTSFSSAVITLHRIWTSIPTSPSQETLFHQLVVQHPGIIAFLFLDMVIFIAATTLTTAQASQIARNITTNELANAVRYGYLRGPDGQFRNPYNHGCRKNCADFLINGFTDDSDIAWLPLQQVAH* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00857 537 ProSiteProfiles Ankyrin repeat region circular profile. 156 188 - -
Pte19g00857 537 ProSiteProfiles Ankyrin repeat region circular profile. 56 87 - -
Pte19g00857 537 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Pte19g00857 537 FunFam S-acyltransferase 10 142 - -
Pte19g00857 537 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Pte19g00857 537 ProSiteProfiles Ankyrin repeat profile. 189 213 IPR002110 GO:0005515
Pte19g00857 537 Pfam Ankyrin repeats (3 copies) 30 119 IPR002110 GO:0005515
Pte19g00857 537 Pfam Ankyrin repeats (3 copies) 128 213 IPR002110 GO:0005515
Pte19g00857 537 SMART ANK_2a 89 118 IPR002110 GO:0005515
Pte19g00857 537 SMART ANK_2a 224 253 IPR002110 GO:0005515
Pte19g00857 537 SMART ANK_2a 156 185 IPR002110 GO:0005515
Pte19g00857 537 SMART ANK_2a 56 85 IPR002110 GO:0005515
Pte19g00857 537 SMART ANK_2a 189 218 IPR002110 GO:0005515
Pte19g00857 537 SMART ANK_2a 122 152 IPR002110 GO:0005515
Pte19g00857 537 Pfam DHHC palmitoyltransferase 360 487 IPR001594 GO:0016409
Pte19g00857 537 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Pte19g00857 537 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Pte19g00857 537 ProSiteProfiles DHHC domain profile. 360 410 - -
Pte19g00857 537 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 6 518 - -
Pte19g00857 537 Gene3D - 142 252 IPR036770 -
Pte19g00857 537 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Pte19g00857 537 Gene3D - 2 141 IPR036770 -
Pte19g00857 537 SUPERFAMILY Ankyrin repeat 28 246 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00857 Pte-Chr19 7077912 7084519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00857 91 254 Miscellaneous Gene Families AT1G07710 27.976 5.03e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00857 K20032 - qsa:O6P43_012472 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00857 19 7077912 7084519 Pte19g00857 19 7077912 7084519 RCT