Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00841 ATGGGGAAAGTCCCTTTTTCTAACCCTAACCCTAAGTTCAACAGCAACAAGAAGAGGACACAATCGAACACAGATGATGCTTCTTCTGTCAATCGGCGATCTAATGAGATTAATCCTCAAAAGGTTAGCTTCAACATCGCTTCTTATACGAAGAAGGAGCTAGACGAGTTGAAGAGTCGTCTGGTTTCAGAGCTCGAACAAATTCGTCAGCTCAAAAATCGCATCGAGCCGGGTGAATTTCAAACAAGGCCTAGCTTCAATGGTCAGCCGTCAAAGAAGTCGTCCATGAACAAGAAGATTTCAGGTAACAAGCGGCCATTCCCTTCAAATCACTGTAAGAATTTGTTGAAACGGTCTTATTCAGAAATTGGTAATTGGACGAAAGAGTGTAGCCAGATTTTGTCAAAGCTCATGAAACAGAAGACGGCTTGGATTTTTAGTACGCCTGTTGACGTTGAGGGAATGGGTCTGCACGATTATTATGATATAATCAAGCAACCAATGGATCTTGGCTCTGTAAAGACGAATCTCGCTGCTAATTTGTATTCATCGCCTTCGGAATTTGCAGCTGATGTTAGATTGACATTCAACAATGCATTGACCTATAACCCTAAAGGGCATGCGGTGAATGATTACGCCAATGAACTTCTGAAGAAGTTCGAGGATATGTTTCGGCCAGTGAGTGAGAAATTTGATGGTGGTTCTGCAGGGAAAGTTCAGGTATTTGATGAAGAGTTGCAAGCAAGTTCTTGGAATCAGGTTGAACCAGAGAGAGTGAAGAACGAAGGGAGTTTGGTGGCTCCGATGGTATCATCCAGGCATCCAGAACCCATACAAGTTCCTGCGAGTTCTTCAAATCCCGTGTCAACCCAATCCCCGGTGAGAACGCCATCTCCTAGGAGGGCTACTCCAGTGAAGCCATTGAAGCAACCAAAGCCCAAAGCAAAGGATCCAAATAAGAGAGATATGAGTCTCGAAGAGAAGCAGAAATTGGGTGAAGGTTTGCAGAGTTTGCCGCCGGAGAAGATGGAACAGGTGGTGCAGATTATCAGGAAGAGGAATGGGCATTTGAAGCAGGATGGGGACGAAATTGAGCTTGATATCGAGGCTGTAGATATAGAAACCCTATGGGAATTAGACCGATTGGTAACAAACTGGAAGAAAATTGTTAGCAAGATGAAGCGGCAGGCTCTTATGAACGAAAATATGGGTTCAAGTAAAGGCAATGGGGAATTACCTTCGAGTGGAAAGTTTGATATTTTACCTGCGGAGCTGAAGAAACCAAAGAAAATGGAAGCAGGAGATGAAGATGTCGACATAGGTGATGAGATGCCAGCAAGTGTCTTTCCCCCTGTGGTGATTGAGAAAGACAAGGACATCGGTGGGGGTCATGCTAGCAGTAGTTCTAGCAGTTCTAGCAGTTCGAGCAGTGATTCCTCTTCATCTAGTGACTCAGACTCTGGAAGTTCTTCTGGTAGTGATTCTGATGCTGACAATGCACATTTGTAG 1509 0.4433 MGKVPFSNPNPKFNSNKKRTQSNTDDASSVNRRSNEINPQKVSFNIASYTKKELDELKSRLVSELEQIRQLKNRIEPGEFQTRPSFNGQPSKKSSMNKKISGNKRPFPSNHCKNLLKRSYSEIGNWTKECSQILSKLMKQKTAWIFSTPVDVEGMGLHDYYDIIKQPMDLGSVKTNLAANLYSSPSEFAADVRLTFNNALTYNPKGHAVNDYANELLKKFEDMFRPVSEKFDGGSAGKVQVFDEELQASSWNQVEPERVKNEGSLVAPMVSSRHPEPIQVPASSSNPVSTQSPVRTPSPRRATPVKPLKQPKPKAKDPNKRDMSLEEKQKLGEGLQSLPPEKMEQVVQIIRKRNGHLKQDGDEIELDIEAVDIETLWELDRLVTNWKKIVSKMKRQALMNENMGSSKGNGELPSSGKFDILPAELKKPKKMEAGDEDVDIGDEMPASVFPPVVIEKDKDIGGGHASSSSSSSSSSSSDSSSSSDSDSGSSSGSDSDADNAHL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00841 502 Gene3D - 108 232 IPR036427 GO:0005515
Pte19g00841 502 PRINTS Bromodomain signature 141 154 IPR001487 GO:0005515
Pte19g00841 502 PRINTS Bromodomain signature 157 173 IPR001487 GO:0005515
Pte19g00841 502 PRINTS Bromodomain signature 173 191 IPR001487 GO:0005515
Pte19g00841 502 PRINTS Bromodomain signature 191 210 IPR001487 GO:0005515
Pte19g00841 502 MobiDBLite consensus disorder prediction 270 323 - -
Pte19g00841 502 Pfam Bromodomain extra-terminal - transcription regulation 323 384 IPR027353 -
Pte19g00841 502 MobiDBLite consensus disorder prediction 1 42 - -
Pte19g00841 502 MobiDBLite consensus disorder prediction 74 108 - -
Pte19g00841 502 MobiDBLite consensus disorder prediction 80 108 - -
Pte19g00841 502 SMART bromo_6 119 229 IPR001487 GO:0005515
Pte19g00841 502 MobiDBLite consensus disorder prediction 277 298 - -
Pte19g00841 502 SUPERFAMILY Bromodomain 121 229 IPR036427 GO:0005515
Pte19g00841 502 ProSiteProfiles NET domain profile. 313 394 IPR027353 -
Pte19g00841 502 Pfam Bromodomain 130 214 IPR001487 GO:0005515
Pte19g00841 502 MobiDBLite consensus disorder prediction 403 502 - -
Pte19g00841 502 Gene3D - 316 393 IPR038336 -
Pte19g00841 502 ProSiteProfiles Bromodomain profile. 138 210 IPR001487 GO:0005515
Pte19g00841 502 MobiDBLite consensus disorder prediction 8 42 - -
Pte19g00841 502 PANTHER OSJNBA0053K19.4 PROTEIN 30 495 - -
Pte19g00841 502 MobiDBLite consensus disorder prediction 463 502 - -
Pte19g00841 502 MobiDBLite consensus disorder prediction 422 436 - -
Pte19g00841 502 Coils Coil 51 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00841 Pte-Chr19 6989850 6992530 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00841 - - qsa:O6P43_012457 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00841 19 6989850 6992530 Pte19g00841 19 6989850 6992530 RCT