Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00828 ATGGCAGAAGAGAAAGTGAAGGGCGAGGCGTTACAGCTGCTGGGTTTGTTTCAAGTACTGCCAAAACTGGTGGTCTTCGATCTCGACTATACTCTCTGGCCTTTTTACTGTGAGTGTCGTTCCAAACGTGAAATGCCGTCTATGTATCCTCATGCGAAAGGCATATTATATGCTCTAAAGGACAAGGGGATTGATGTTGCCATTGCTTCAAGATCTCCTACTCGAGATATTGCAGAAACTTTTCTTGATAAATTGAATGTCAAGTCAATTTTTGTTACAGAGGAAATTTTCTCTAGTTGGACTCACAAGACCGATCATTTTCAAAAGATTCATTCTAAAACTGGGGTCCCCTTCAGCTCTATGCTCTTTTTTGATGATGAGAATAGGAACATCCAAGCGGTCTCAAAAATGGGAGTAACAAGCATTTTGGTGCACAAAGGGGTTAATCTCAAGGCACTCCAAGAAGGACTCACAAAGTTTTCTGAAAATTGGAGTATCTCTCAAAAGAACAAGCAGAAGTGGCTCTCGAAGTTTTCACAGAATTCAAGCGCCTCTGAAAGTGATTCTCAGAAATAG 576 0.4115 MAEEKVKGEALQLLGLFQVLPKLVVFDLDYTLWPFYCECRSKREMPSMYPHAKGILYALKDKGIDVAIASRSPTRDIAETFLDKLNVKSIFVTEEIFSSWTHKTDHFQKIHSKTGVPFSSMLFFDDENRNIQAVSKMGVTSILVHKGVNLKALQEGLTKFSENWSISQKNKQKWLSKFSQNSSASESDSQK* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00828 191 SUPERFAMILY HAD-like 21 158 IPR036412 -
Pte19g00828 191 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 1 170 IPR010036 GO:0016791
Pte19g00828 191 FunFam Magnesium-dependent phosphatase 1 6 166 - -
Pte19g00828 191 CDD HAD_MDP-1_like 21 144 IPR035679 -
Pte19g00828 191 Pfam Acid Phosphatase 20 162 IPR010036 GO:0016791
Pte19g00828 191 SFLD C1.5.2: MDP Like 3 168 - -
Pte19g00828 191 SFLD Haloacid Dehalogenase 3 168 - -
Pte19g00828 191 Gene3D - 7 165 IPR023214 -
Pte19g00828 191 NCBIfam HAD-IIIC family phosphatase 22 137 IPR010033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00828 Pte-Chr19 6686560 6689979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00828 K17619 - qsa:O6P43_031670 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00828 19 6686560 6689979 Pte19g00828 19 6686560 6689979 RCT