Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00556 ATGGCGGATCTTAAGTCGACATTCCTTAAGGTATACTCCACTCTCAAAGCTGAAATCCTCGAAGATCCTGCTTTCGAGTGGTCTGACGATTCTCGTCAATGGGTCGAAAAGATGCTAGACTACAATGTCCCTGGAGGGAAGCTGAACCGTGGACTATCGGTCATTGACAGTTACAAGTTACTAAAAGGAAAAGAATTGAGTGAAGATGAAATATTTCTTGCAAGTGCTCTTGGCTGGTGTATTGAATGGCTTCAAGCCTATTTTCTTGTGCTTGATGACATTATGGATGCATCTCACACACGTCGCGGTCAACCATGTTGGTTTCGGGTGCCAAAGGTGGGCATGATTGCAGTGAATGATGGCATTCTACTGCGAAACCATATCCCAAGAATTCTTAAGAAACACTTCAGGCAAAAGGACTATTATGTTGATCTTCTTGATTTGTTTAATGAGGTGGAGTTTCAGACTGCTAATGGACAAATGATTGACCTGATCACTACACTGGAAGGAGAGAAGGACCTGTCTAAGTACTCATTGTCACTCCACCGCCGAATCGTTCAGTACAAAACTGCCTATTACTCATTTTACCTTCCAGTTGCATGTGCATTGCTCATGGCGGGTGAGAATCTGGATAATCATGTTGACGTGAAGAACATATTGGTTGATATGGGAACCTACTTTCAAGTGCAGGACGATTATCTGGACTGCTTTGGTGATCCTGAAACAATTGGAAAGATTGGAACGGATATTGAGGATTTTAAGTGCTCCTGGTTAGTTGTGAAAGCTTTGGAGCTTAGTAATGAAGAGCAAAAGAAAGTACTGCATGAAAACTATGGGAAGCCAGATGCTGAAAATGTTGCAAAAGTACAAGCCCTCTATAAGGAGCTTGATCTTGAGGGTGTGTTTACAGACTATGAGAATAAAAGCTATGATAGGCTAGTGAAGTCCATTGAAGTTCATCCTAGCAAAGCAGTCCAAGCAGTGTTGAAGTCCTTCCTGGCAAAAATATACAAGAGGCAGAAGTAA 1026 0.4211 MADLKSTFLKVYSTLKAEILEDPAFEWSDDSRQWVEKMLDYNVPGGKLNRGLSVIDSYKLLKGKELSEDEIFLASALGWCIEWLQAYFLVLDDIMDASHTRRGQPCWFRVPKVGMIAVNDGILLRNHIPRILKKHFRQKDYYVDLLDLFNEVEFQTANGQMIDLITTLEGEKDLSKYSLSLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHVDVKNILVDMGTYFQVQDDYLDCFGDPETIGKIGTDIEDFKCSWLVVKALELSNEEQKKVLHENYGKPDAENVAKVQALYKELDLEGVFTDYENKSYDRLVKSIEVHPSKAVQAVLKSFLAKIYKRQK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00556 341 PANTHER FARNESYL-PYROPHOSPHATE SYNTHETASE 2 341 IPR039702 GO:0008299|GO:0016765
Pte19g00556 341 CDD Trans_IPPS_HT 30 339 IPR000092 GO:0008299
Pte19g00556 341 FunFam Farnesyl pyrophosphate synthase 1 340 - -
Pte19g00556 341 SUPERFAMILY Terpenoid synthases 8 340 IPR008949 -
Pte19g00556 341 ProSitePatterns Polyprenyl synthases signature 2. 223 235 IPR033749 -
Pte19g00556 341 Gene3D Farnesyl Diphosphate Synthase 2 340 IPR008949 -
Pte19g00556 341 Pfam Polyprenyl synthetase 33 295 IPR000092 GO:0008299
Pte19g00556 341 SFLD Isoprenoid Synthase Type I 10 339 - -
Pte19g00556 341 ProSitePatterns Polyprenyl synthases signature 1. 89 103 IPR033749 -
Pte19g00556 341 SFLD Polyprenyl Transferase Like 10 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00556 Pte-Chr19 4392220 4396554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00556 K00787 - qsu:112038794 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00556 19 4392220 4396554 Pte19g00556 19 4392220 4396554 RCT