Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00440 ATGACAGTTCGATCGTTGTTCGACGGCGCAGAAATCAGGTGGGAGTTCGAGAAAGCCGGAATAGACCCGAAGTTTGTTGGCCTAATATGGAAACATGTGCTTCACTCCCTAATAAACCAAAGTCGCAATTCCGCTGCTTCTGATAATCGGTCTCAACAGCAAGAGCTGCAATGGGATTGGGAGAGACAGGTCCCTTCTCTGCCTGCCCCCGCCTATTCCCTTCTTCGTTCTATGTTTAAATATCCCCTCTCTTCCACTCTTCACTCTGTATTCCATTCCTCTGACAACGTCACCACAAAGCTCCTCATTAAGCTCCAGAATGGTGCTTTTGTGGAGGCTGTTATTATGAAATATGATACTCGTTTGGGCAAATACGGAGGCAAGCCCCGTCCAGGTGGTCTTAGATCAACCTTGTGCATATCATCTCAGGTTGGTTGTAAAATGGGTTGCAAATTCTGTGCAACTGGAAGCATGGGTTTTAAGAACAATCTCTCATCGGGAGAAATCGTTGAACAATTGATCCATGCCTCTTGTTTGTCACAAATACGAAATGTTGTCTTCATGGGTATGGGAGAGCCTTTAAATAACTACTCTGCCTTGGTGGAATCAGTCCGTGTCATGTCTGGATTGCCATTTCAACTGTCACAGAAAAGAATTACCGTCTCAACGGTTGGCATCACTCATGCCATCCACAAGCTTCATGGTGATCTTCCTGGTCTAAACCTAGCGGTCTCACTCCATGCCCCAGCTCAGGAAATCCGTTGTCAGATAATGCCTGCTGCTCGCGCTTTTCCTCTAGAAAAACTCATGGGTTCACTGCAAGAGTATCAAAGGAAAAGTCAGCAAAAAATCTTAATTGAGTATATAATGCTTGATGAGGTGAATGATGAAGAACAGCACGCTCATCAACTTGGGAAGCTGCTAGAGAGTTTACAAGTGGTGGTGAACTTGATACCATTCAATCCCATTGGTAATTTAAGCCAACATAGGCCAAGTAGTGAACAGAAAGTATCAAGTTTCCAGCAGATTCTTAGGGGAGCATACAACATCCGAACTACAATTAGGAAGCAAATGGGTCAGGATATTAGTGGTGCATGTGGACAGCTTGTAGTTAACCTGCCTGACATGAAATCTATTGAGAAAGCAGCCCTCTTACCAGACATTGAAGATCTCCATTTATGA 1182 0.4442 MTVRSLFDGAEIRWEFEKAGIDPKFVGLIWKHVLHSLINQSRNSAASDNRSQQQELQWDWERQVPSLPAPAYSLLRSMFKYPLSSTLHSVFHSSDNVTTKLLIKLQNGAFVEAVIMKYDTRLGKYGGKPRPGGLRSTLCISSQVGCKMGCKFCATGSMGFKNNLSSGEIVEQLIHASCLSQIRNVVFMGMGEPLNNYSALVESVRVMSGLPFQLSQKRITVSTVGITHAIHKLHGDLPGLNLAVSLHAPAQEIRCQIMPAARAFPLEKLMGSLQEYQRKSQQKILIEYIMLDEVNDEEQHAHQLGKLLESLQVVVNLIPFNPIGNLSQHRPSSEQKVSSFQQILRGAYNIRTTIRKQMGQDISGACGQLVVNLPDMKSIEKAALLPDIEDLHL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00440 393 SUPERFAMILY Radical SAM enzymes 136 339 - -
Pte19g00440 393 PANTHER 23S RRNA METHYLTRANSFERASE 8 377 IPR040072 -
Pte19g00440 393 PIRSF Cfr 49 385 IPR004383 GO:0006364|GO:0008173
Pte19g00440 393 Pfam 4Fe-4S single cluster domain 145 232 - -
Pte19g00440 393 CDD Radical_SAM 145 346 - -
Pte19g00440 393 FunFam 23S rRNA methyltransferase 85 376 - -
Pte19g00440 393 ProSiteProfiles Radical SAM core domain profile. 132 361 IPR007197 GO:0003824|GO:0051536
Pte19g00440 393 SFLD adenosine C2 methyltransferase (RlmN-like) 84 374 IPR004383 GO:0006364|GO:0008173
Pte19g00440 393 Pfam Radical SAM superfamily 141 299 IPR007197 GO:0003824|GO:0051536
Pte19g00440 393 Gene3D Aldolase class I 86 376 IPR013785 -
Pte19g00440 393 SFLD methyltransferase (Class A) 84 374 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00440 - - qsa:O6P43_031130 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00440 19 3490846 3495329 Pte19g00440 19 3490846 3495329 RCT