Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00439 ATGGAGCTGCAAATATCATCCATGATATTCTTCTTGGGGTTGCTGGTGGTGTCTTTAGTGCCCTCGTCAATCGCTAGATTTGTGGTCGAGAAAAACAGCTTGTCGGTGACATCACCTGAGAAAATTAAGGGTACACATGATACTGCGATCGGGAACTTCGGAATACCTCAATATGGTGGCAGCATGGCTGGTACTGTTTTCTATCCCAAAGAAAATCAAAAGGGTTGTAAAGATTTCGATGAGTTTAAGATTTCCTTCAAATCAAAGCCTGGTGCTCTTCCAGCCTTTGTTTTGGTCGATCGTGGAGATTGTTTTTTCGCTTTAAAGGTGTGGAATGCCCAGAAGGCTGAAGCTTCTGCAGTTCTCGTTGCAGATGACATTGAGGAACCATTAATAACCATGGATACGCCTGAAGAGGATGCTGCATCCGCAAAATATATAGAAAACATTACAATACCTTCTGCCCTTGTTACTAAGAGTTTTGGTGAAACGTTGAAGAAAGCCATAAGTAGTGGGGAGATGGTGAACATTAATCTTGATTGGAGAGAAGCTGTTCCACACCCAGATGATCGAGTTGAGTATGAGTTGTGGTCTAACAGCAATGATCAATGTGGGGTTAAATGTGACATGCTGATGGAATTCATAAAGGATTTTAAGGGTGCGGCCCAGTTACTTGAGAAAGGTGGTCATACTCAATTTACACCGCATTACATAACTTGGTACTGTCCCCAGGCTTTTAGCTTAAGCAAACAGTGCAAGTCGCAGTGCATAAATCATGGAAGGTATTGTGCCCCTGACCCTGAGCAGGACTTTACATCTGGCTATGATGGGAAAGATGTGGTTATTGAGAATTTGAGACAGCTTTGTGTTTTCAAAGTCGCGAATGAAACCAAGAAGCCTTGGGTGTGGTGGGACTATGTTACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAATACAACAAGGAATGTGCGGATGGTGTTCTTAAATCCCTTGGCCTTGATATGAAAAAAATAGAGAACTGCATGGGAGATCCAGATGCTGATGCCGAGAATCCTGTTTTGAAACAAGAGCAAGATGCGCAGATTGGGAAAGGATCACGAGGTGATGTTACTATATTGCCAACCCTTGTTGTCAACAATCGACAATATCGAGGTAAGTTGGAAAAAGGTGCCTTTCTGAAGGCCATCTGTGCTGGATTTGAGGAAACTACTGAGCCAGCTGTTTGCTTGAGCAGTGATGTGGAGACAAACGAATGTCTAGAAAACAATGGTGGCTGTTGGCAAGATAAAATAGCCAATATAACAGCCTGCAAGGACACATACCGTGGACGAGTATGTCAGTGCCCCTTAGTTGATGGTGTACAGTTCAAAGGAGATGGTTACAACTCCTGTTTAGCTAGTGGTCCCGGTAGATGCAGCATAAATAATGGAGGATGTTGGCATGAAGCCCGGAATGGACATGCATTTTCGGCTTGTTCAGACAACGGGAATGCAAAATGTCAGTGTCCCCCTGGATTTAAAGGAGATGGTGTCAAAAGCTGTGAAGATGTCGATGAATGCAAAGAGAAGAAAGCCTGTCAATGCCCTGAATGCAAATGCAAGAATACCTGGGGGAGCTACGATTGTACCTGCAGTGGAGATCTCCTGTACATGAGGGAGCATGATACATGCATAAGTAAAATGGCCAGTGCCAGTGGAGGTAAATCTGCTTGGACTGCTGTTTGGGCCATTTTACTTGGTTTAGTTATGGCTGCAGGCGGGGCATATATTGTTTACAAATACAGACTGAGATCATACATGGATTCTGAAATCCGCGCTATTATGGCACAGTATATGCCATTGGATAGCAATGGAGATGTTACAAGTCAACTCAATGTGGAACGGGCATAA 1896 0.4351 MELQISSMIFFLGLLVVSLVPSSIARFVVEKNSLSVTSPEKIKGTHDTAIGNFGIPQYGGSMAGTVFYPKENQKGCKDFDEFKISFKSKPGALPAFVLVDRGDCFFALKVWNAQKAEASAVLVADDIEEPLITMDTPEEDAASAKYIENITIPSALVTKSFGETLKKAISSGEMVNINLDWREAVPHPDDRVEYELWSNSNDQCGVKCDMLMEFIKDFKGAAQLLEKGGHTQFTPHYITWYCPQAFSLSKQCKSQCINHGRYCAPDPEQDFTSGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKECADGVLKSLGLDMKKIENCMGDPDADAENPVLKQEQDAQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAFLKAICAGFEETTEPAVCLSSDVETNECLENNGGCWQDKIANITACKDTYRGRVCQCPLVDGVQFKGDGYNSCLASGPGRCSINNGGCWHEARNGHAFSACSDNGNAKCQCPPGFKGDGVKSCEDVDECKEKKACQCPECKCKNTWGSYDCTCSGDLLYMREHDTCISKMASASGGKSAWTAVWAILLGLVMAAGGAYIVYKYRLRSYMDSEIRAIMAQYMPLDSNGDVTSQLNVERA* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00439 631 CDD EGF_CA 518 546 - -
Pte19g00439 631 Gene3D Laminin 472 554 - -
Pte19g00439 631 Gene3D - 24 188 - -
Pte19g00439 631 Pfam PA domain 64 165 IPR003137 -
Pte19g00439 631 SMART egfca_6 518 560 IPR001881 GO:0005509
Pte19g00439 631 Pfam Complement Clr-like EGF-like 501 521 IPR026823 -
Pte19g00439 631 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Pte19g00439 631 FunFam vacuolar-sorting receptor 1 411 467 - -
Pte19g00439 631 FunFam Vacuolar-sorting receptor 1 24 188 - -
Pte19g00439 631 SUPERFAMILY PA domain 78 174 IPR046450 -
Pte19g00439 631 CDD PA_VSR 52 179 - -
Pte19g00439 631 Gene3D Glutaredoxin 254 401 - -
Pte19g00439 631 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 7 620 - -
Pte19g00439 631 ProSitePatterns EGF-like domain signature 2. 502 516 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00439 Pte-Chr19 3481755 3487364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00439 25 632 Miscellaneous Gene Families AT2G14740 82.401 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00439 - - qsa:O6P43_031124 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00439 19 3481755 3487364 Pte19g00439 19 3481755 3487364 RCT