Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02127 ATGGAAGCGACTCTCAGTTCTCATTCACCATTTACCGTTCAATTTCAATCGCCATATCGGCTCTATTCTCCGTTACACTTCGTCGCGTCGCGTCAAATCCGCAATCATAAATTCATATCAAGGTCGCGCAAGAAGTCCGCAAACTTCATCCGATTTGGTCAGAAGCTCCAAGCAATTCTCCCCACAAGTTCCAAACACGAATTAGAAACAGCTCCAGAAGTTTCTACTAGCTCAGGATTGATTAAAACAGAGGAGAAAACCATTGGTTCGGTCGTAAACTGTGAAGAAATCGAGGGGAGACTGCTGCTGGCTTGTATTTCCAAGCAAACTCTGTGTACATTGTTTTGCCTTGTTATTGGTTTTTGTCAGATTGGTGTATATCGTGCTCCAGCGATTGCTCTGATGACTGTGAACAAGGTTGAGAATGCGAAAGAGTTGCATAAGCGTCATGAGTATTCAGAGTTCACTAAGACCTTGCTTAGGGAAGTTTCTGGTTTGCTAAGAACCATAGAATATGTGAGGGAAGGCAGAGGAAATGTAAGTGATGTGCAGGAATCCTTGGAGAGTGTGCAATCGACGAAGGAGAGATTGCAGAATCAGATCATGGATGAGCTTTACCAAGAGTTGGAACGGTTAAAGAAAGAGAAAGAGAGATCGGTAAAACAGTCAGAAAAGGTTCAGAATGAGCTTCTGGAGGTGAGGATGACATATGACGAGTTGAAAGCGAATGCGGGTAAAAGGGAAGAGAAGGTGACGATGGATAGATTAGAAAATAGAGTGAGAAATTTGGACGAGGAGTATAAAAGGATTTCGGAACGAGTTGATCAGTTTGAGGATCACATGTGGAGGAGAGAGAGGGCGGCATTAGATATAGGTGCAAGGGAAATTTCTTTTATAGGAACTGAATGTGAACGATTAGTGAAACAATTTGTTCAAAAAATGAAGTATAGACGCAATGAAAGTTTAGAAAAAGGCTCAATTACGAAGCTTTCTAAACATGACATTCAAAAGGAATTGGAAGCAGCACAAAGAAAACATTTAGAGCAAATGATTCTTCCTAGTGTGGTGGAAGTTGAAGCTCTTGAGCCATTATTTAATCAAAGTTCAATTGAATTTGCTCAACGAATAAGACGATGCTTTAAAGAGACAAGAGAGCTGCAAAGAAATTTGGAGGATCAAATTAGGAAAAGGATGAAAAAATTTGGAAAGGAAAAGTGTTATATTGTTCAGGAACCAGATTATGATGTTGTGAAGGGTTTTCCAGAATTAAAGCTTAAGTGGACATTTGGAGATAAGGAGGTCGTAGTTCCTAAAGCTGTTAGCCTCCAGTTGTATCATGGTTGGAAGAGGTGGCTGGAAGAAGCTAAGGCGGTCCTGAAGAGAAACGTAATTGAAAACCCCAGTTTTGGTAAACAGTATGTGGCTCAAAGACAGGAACGAGTTCTTCTGGATCGAGATAGAGTAGTGTCAAAGACTTGGTACAATGAAGGAAAGCAGAGATGGGAGATTGAACCTATCGCTGTTCCATATGCTGTGTCCAAAAAACTGGTTGAATTTGCTCGGATCAGACATGATTGGGCTTTCATGTATATTTCAATAAAGGGAGAAGACAGAGAATTTTTTGTTGACATAAAGGAATTTGATATGATGTTTGAAGAATATGGGGGTTTTGATAATCTGTACTTGAAAATGCTTGCCTGTGGTGTTCCAACAGTAATTGAGGTCACGTGGATCCCTCTGTCTGAGTTGGATCTTCGGAAACAGTTTCTGTTAGCATGGAGGTTTTCTGTGCTGTCCTTGAAAGGATTATGGACGACTGAAATTGTCTCCAATGCACTAGAGTGGATCTTCTTGACAATGGAAGAGATAACTGAAGATATAATGACCATGATTGGGTTTCCGCTTCTGGACTTTGTAGTCCCTTACCCGGTGAAGATTCGATTGGGAATGGCATGGCCAGAAGAATCTGAAGAGACAGTTGCCTCTTCATGGTACTTGCAATGGCAATCCATTGTAGAAAGCAACTTCCTATCCAGAAGAAAAGATGATGTAAAATGGTTCCTTTGGATTTTAATACGAAGTGCTGTGTGTACATTTGCTTTGTTTTATGTATTCCTATTCTTGAAGAGAAAAGTCACCAGACTTCTTGGTTATGGGCCTTTACGTAGAAATCCAAACTTGCACAAGCTGCGGCGAGTGATTTGGTATTTGAATTATAGAAAGAAAAGAATCAAGCGCAAGAGGAAGGCTGGTTTTGATCCTATTAAAAGAGCTTTTGAGCGTATGAAGAGGGTGAAGAAACCAGCAATACCGTTGAAAGACTTTGCTAGTATTGACTCTATGAGAGATGAAATCAGTGAAGTTGTAGCCTTCTTGCAAAATCCCAAAGCCTTTGAAGACATGGGTGCTCGAGCTCCTAGGGGTGTTCTTATTGTAGGCGAGAAGGGAACAGGTAAGACATCTCTTGCTTTGGCAATAGCTGCAGAGGCTCGAGTCCCTGTTGTGAATGTTAAAGCTAAACAACTGGAAGCTGGGCTATGGGTTGGCCAAAGTGCATCCAATGTCAGGGAACTCTTCCAAACAGCAAGAGACTTGGCTCCTGTGATCATTTTTGTGGAGGATTTTGATCAGTTTGCTGGTGTTCGTGGTGAGACCTTACATACCAGACACCAGGATCACGAGGCTTTCATTAATCAACTACTTGTGGAACTGGATGGGTTTGAGAAACAAGATGGTGTAGTTTTGATGGCTACTACCAGCAATCTCAAGGGAATTGATAAGGCCTTACAGAGACCTGGCCGAATGGATAGGATATTCCATCTTCAAAGGCCAACCCAAACAGAGAGGGAAAAGATACTATGCATTGCTGCAAAGGAAACCATGGACCATGGGCTGATTGATTATGTGGACTGGAAAAAGGTTGCCGAGAAGACTGCTTATTTAAGGCCTATTGAACTCAAGCTTGTCCCTACAGCTTTGGAAGGAAGTGCATTTCGGAGCAAGTTTCTTGACAAAGATGAGCTAATGAGTTACTGTTCATTCTTGGCAACTTACAGTTTTATCATCCCCAAATGGGTCCGGGAAACTAGTGTTGCAAAGAATTTGAGCAAGTTGTTGGTAAATCATCTTGGCTTGATGTTGACACCGGAAGATTTGCAAGTTGTTGTTGATTCAATGGAACCGTATGGTCAGATAAGCAACGGAATAGAACTTCTAAATCCTCCACTTGATTGGACGAGGAAAACAAAGTTCCCACATGTTGTTTGGGCTGCAGGTCGTTGCTTGATTGCTTCTCTCTTGCCAAATTTTGATGTTGTTGATAATGTATGGCTTGAGCCATTATCTTGGCAGGGAATTGCGTGCACAAAAATCACAAAGGCAAGGAATGAAGGTTCTGTTGATGGGAATCCTGAATCAAGATCATATCTTGAAAAGAAACTTGTATTTTGCTTCGGTTCTTATGTTTCATCACAGATGCTGCTTGCATTTGGGGAAGAGAATTTTCTGTCTTCTTCGGAATTGCATCAGGCTCAAGAGATAGCTACACGGATGGTAATTCAGTATGGATGGGGACCTGATGATAGTCCTGCTATCTACTACTATAGTAATGCGGTAGCAGCACCAAGCATGGGAGATTCCCATGAGTATGAAATGGCAGCTAAAGTTGAGAAGATGTTTGATCTGGCATATTATAAAGCAAAAGGCATGTTGCAAAATAACCGCCATGTGTTGGAGAAGGTTGTGGACGAATTACTAGAGCATGAAATTTTGAGTGGAAAGGATTTGGATAGGATAATGGAGGACAATGGGGCCGTTAGAGAAAAAGAACCCTTCTCTCTTTCTGAGGATTATGGTAGAGAGCCGTCATCTAGCAGCTTTCTGAATGAAGCAAATGCATCTGGAGATGTTCTGCTAGCTTCCTAA 3924 0.4154 MEATLSSHSPFTVQFQSPYRLYSPLHFVASRQIRNHKFISRSRKKSANFIRFGQKLQAILPTSSKHELETAPEVSTSSGLIKTEEKTIGSVVNCEEIEGRLLLACISKQTLCTLFCLVIGFCQIGVYRAPAIALMTVNKVENAKELHKRHEYSEFTKTLLREVSGLLRTIEYVREGRGNVSDVQESLESVQSTKERLQNQIMDELYQELERLKKEKERSVKQSEKVQNELLEVRMTYDELKANAGKREEKVTMDRLENRVRNLDEEYKRISERVDQFEDHMWRRERAALDIGAREISFIGTECERLVKQFVQKMKYRRNESLEKGSITKLSKHDIQKELEAAQRKHLEQMILPSVVEVEALEPLFNQSSIEFAQRIRRCFKETRELQRNLEDQIRKRMKKFGKEKCYIVQEPDYDVVKGFPELKLKWTFGDKEVVVPKAVSLQLYHGWKRWLEEAKAVLKRNVIENPSFGKQYVAQRQERVLLDRDRVVSKTWYNEGKQRWEIEPIAVPYAVSKKLVEFARIRHDWAFMYISIKGEDREFFVDIKEFDMMFEEYGGFDNLYLKMLACGVPTVIEVTWIPLSELDLRKQFLLAWRFSVLSLKGLWTTEIVSNALEWIFLTMEEITEDIMTMIGFPLLDFVVPYPVKIRLGMAWPEESEETVASSWYLQWQSIVESNFLSRRKDDVKWFLWILIRSAVCTFALFYVFLFLKRKVTRLLGYGPLRRNPNLHKLRRVIWYLNYRKKRIKRKRKAGFDPIKRAFERMKRVKKPAIPLKDFASIDSMRDEISEVVAFLQNPKAFEDMGARAPRGVLIVGEKGTGKTSLALAIAAEARVPVVNVKAKQLEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDQFAGVRGETLHTRHQDHEAFINQLLVELDGFEKQDGVVLMATTSNLKGIDKALQRPGRMDRIFHLQRPTQTEREKILCIAAKETMDHGLIDYVDWKKVAEKTAYLRPIELKLVPTALEGSAFRSKFLDKDELMSYCSFLATYSFIIPKWVRETSVAKNLSKLLVNHLGLMLTPEDLQVVVDSMEPYGQISNGIELLNPPLDWTRKTKFPHVVWAAGRCLIASLLPNFDVVDNVWLEPLSWQGIACTKITKARNEGSVDGNPESRSYLEKKLVFCFGSYVSSQMLLAFGEENFLSSSELHQAQEIATRMVIQYGWGPDDSPAIYYYSNAVAAPSMGDSHEYEMAAKVEKMFDLAYYKAKGMLQNNRHVLEKVVDELLEHEILSGKDLDRIMEDNGAVREKEPFSLSEDYGREPSSSSFLNEANASGDVLLAS* 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02127 1307 MobiDBLite consensus disorder prediction 1284 1298 - -
Pte18g02127 1307 Coils Coil 180 243 - -
Pte18g02127 1307 MobiDBLite consensus disorder prediction 1276 1307 - -
Pte18g02127 1307 SUPERFAMILY FtsH protease domain-like 1079 1276 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pte18g02127 1307 FunFam ATP-dependent zinc metalloprotease FtsH 3 751 962 - -
Pte18g02127 1307 SMART AAA_5 805 945 IPR003593 GO:0016887
Pte18g02127 1307 Coils Coil 246 280 - -
Pte18g02127 1307 Pfam Peptidase family M41 1138 1265 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pte18g02127 1307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 766 979 IPR027417 -
Pte18g02127 1307 Gene3D - 753 963 IPR027417 -
Pte18g02127 1307 Gene3D Peptidase M41 1078 1275 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pte18g02127 1307 ProSitePatterns AAA-protein family signature. 913 931 IPR003960 GO:0005524|GO:0016887
Pte18g02127 1307 PANTHER METALLOPROTEASE M41 FTSH 224 1268 - -
Pte18g02127 1307 Pfam ATPase family associated with various cellular activities (AAA) 809 942 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02127 Pte-Chr18 31270257 31281620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02127 746 959 Miscellaneous Gene Families AT3G02450 39.720 2.86e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02127 - - qsa:O6P43_011245 1673.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02127 18 31270257 31281620 Pte18g02127 18 31270257 31281620 RCT