Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00513 ATGGGTGAGGTTGGTGAGAGCAGCAGGGTGGGTGTAAGCCTTGATCAGTTACCATCTGCCCTTCTCGACACTATCATCTTGAAGCTCGATGTTGCTTCTATCTGCTCCGTCGCTTCCACCTGCACCACCTTCAATTCCTGCGCATCTCACATCCTATCTTTGCTCCCTAACTTCCACCTCCTTGAGATATCGCCTACCTTTAATTTATTGCGACCTCTGTTGCCGCCAAATCCGAATCTAAGAAGCCTCAAGGTAGATTGTGGACGACTCGACGATTCAGCCATATCTCTTCTCGCTAATCCATCTTTGCACGAGCTTTGTCTGCATAATTGCGCTGATTTTAGTGGAAAACTTCTTTCTGACATCGGAAATTACTGCAAGGAACTAAGGTCTCTCTACTTGGGTTCTGTAGCTGAAAAAAGAGGGCGGGCAATTCATAGTTCTGACCTGGAGGAATTACTCAGTGGTTGCTTTCAGTTGGAAGCGCTGATCTTGATGTTTGATGTCTCACTATTTCTGCGTCAAAACTTCAGTCGCGCTTGGTCTTTGGCTTCAGAAAAGCTCACTTCTCTAGAAATTGGATACGTTTCTTCTGTGACAGTGACAGAATTACTTAGCGCAAATTTGGGACCTCATCAGTCCCATACTACCCAGCCCTCTATATTGCCAAGCATCCAGAAACTATGCCTTTCGGTGGATTATATTACAGATGCTATGGTTGGAACAATATCTAGAGGTCTTCCATCATTAACCCATTTGGATCTTCGAGACGCACCTCTTATTGAACCAAGAGTTACTTTTGACCTGACAAATGCTGGGCTTCAGCAAATCAACCAATATGGGAAATTGAAACACCTCTCTTTAGTGCGGAGCCAAGAGTATCTACTTACATACTTTCGAAGAGTAAATGATTTGGGCTTACTCCTGATGGCCGATAAGTGTGCAGGCATGGAAAGTATATGCCTTGGTGGTTTTTGTCGAGTCACTGACACTGGTTTCAAGACAATTCTGCATTCATGTTCTCGATTACTCAAGTTGAGGGTGTCTTATGCTACTCAATTAACTGATCTTGTGTTTCATGATATTTGCGCAACATCACTTTCTCTGACACATGTAAGCTTGAGGTGGTGTAATCTCTTAACCAACCATGCAGTTTCAAGTTTGGCATCTAACCAAGATCTTAAGGTTCTTGACTTGAGAGACTGCAGATGTCTTGGAGATGAAGCACTACGAGCCATCAGTTCTCTTCCTAAACTCAAAGTTCTACTGCTAGATAGTTCTGATATAAGTGATGTGGGAGTGGCATTCTTACAATCAGTTGTTATTAGATCACTACAGTCATTGTCTCTTCGAGGGTGCAAAAGGCTGACAGATAAATGCATTTCGTCTCTATTTGACGGTTCTTCTGAAACAGAATTGCGTGAACTGGACATATCAAATCTTCCTAACCTTTCTGATAATGGAATTCTGCAACTGGCAAAAAGTCGGATCCCCATATCTGAACTCCGAATGCGGCAGTGCCCTCTAATAGGCGATACCTCTGTGATGGCTTTGGCATCAATGCAGGTTGATGAGGATAGACAGCATGGAAGCAGCCTGCGATTGTTGGATCTGTATAACTGTGGTGGTATTACGCCACTGTCATTCCGTTGGCTGAAGAAACCATACTTTCCAAGGCTTAGGTGGTTAGGGGTGTCAGGAAGTGCAAACAGAGATATAGTAGATGCTTTAGGTAGGAGCAGGCCATTCCTCCATGTTGCTACGCATGGGGAGGAGCTGGGGGCTGACCCTTATGATCACATGAACGATCTGGCCATTCTTGACTATGATGAGCTGGATGAATTTGAGCAATGGCTTTTTGAAGATGAGGGTGATGCTAATGATGAAGATATGGTGAATGCTGAGATGAATGAAGAACAAGTTTGA 1926 0.4393 MGEVGESSRVGVSLDQLPSALLDTIILKLDVASICSVASTCTTFNSCASHILSLLPNFHLLEISPTFNLLRPLLPPNPNLRSLKVDCGRLDDSAISLLANPSLHELCLHNCADFSGKLLSDIGNYCKELRSLYLGSVAEKRGRAIHSSDLEELLSGCFQLEALILMFDVSLFLRQNFSRAWSLASEKLTSLEIGYVSSVTVTELLSANLGPHQSHTTQPSILPSIQKLCLSVDYITDAMVGTISRGLPSLTHLDLRDAPLIEPRVTFDLTNAGLQQINQYGKLKHLSLVRSQEYLLTYFRRVNDLGLLLMADKCAGMESICLGGFCRVTDTGFKTILHSCSRLLKLRVSYATQLTDLVFHDICATSLSLTHVSLRWCNLLTNHAVSSLASNQDLKVLDLRDCRCLGDEALRAISSLPKLKVLLLDSSDISDVGVAFLQSVVIRSLQSLSLRGCKRLTDKCISSLFDGSSETELRELDISNLPNLSDNGILQLAKSRIPISELRMRQCPLIGDTSVMALASMQVDEDRQHGSSLRLLDLYNCGGITPLSFRWLKKPYFPRLRWLGVSGSANRDIVDALGRSRPFLHVATHGEELGADPYDHMNDLAILDYDELDEFEQWLFEDEGDANDEDMVNAEMNEEQV* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00513 641 Gene3D Ribonuclease Inhibitor 439 585 IPR032675 -
Pte18g00513 641 SUPERFAMILY F-box domain 11 50 IPR036047 GO:0005515
Pte18g00513 641 PANTHER UNCHARACTERIZED 187 464 - -
Pte18g00513 641 SUPERFAMILY RNI-like 52 290 - -
Pte18g00513 641 Pfam F-box domain 14 51 IPR001810 GO:0005515
Pte18g00513 641 SMART LRR_CC_2 496 521 IPR006553 -
Pte18g00513 641 SMART LRR_CC_2 530 555 IPR006553 -
Pte18g00513 641 SMART LRR_CC_2 442 467 IPR006553 -
Pte18g00513 641 SMART LRR_CC_2 366 391 IPR006553 -
Pte18g00513 641 SMART LRR_CC_2 392 416 IPR006553 -
Pte18g00513 641 SMART LRR_CC_2 314 339 IPR006553 -
Pte18g00513 641 SMART LRR_CC_2 470 495 IPR006553 -
Pte18g00513 641 SMART LRR_CC_2 247 280 IPR006553 -
Pte18g00513 641 Gene3D Ribonuclease Inhibitor 39 438 IPR032675 -
Pte18g00513 641 FunFam F-box/LRR-repeat protein 10 isoform A 51 466 - -
Pte18g00513 641 Pfam Leucine Rich repeat 390 414 IPR001611 GO:0005515
Pte18g00513 641 SUPERFAMILY RNI-like 303 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00513 Pte-Chr18 10934564 10938575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00513 - - cit:102611025 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00513 18 10934564 10938575 Pte18g00513 18 10934564 10938575 RCT