Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00502 ATGGCGGCCGCCAATGCTTCGTGGCAACCCCAGGAACAAGGCGTCAAAGAGATCTGTGCTTTGTTGGAACAGCAGATTTCTCCTGCTGCTGTAGCTGCTGACAAGTCGCAGATTTGGCAACGACTTCAGCACTTCTCGCAGTTTCCAGACTTCAATAATTACCTCGTTTTTATCCTTGCACGTGCTGAGGGGAAATCAGTGGAGATTCGGCAGGCTGCAGGTCTGTTGTTGAAGAATACTCTTAGAACTACTTTCAAATCCATGCTTCCTGCGTACCAACAATATATAAAAGCGGAGTTGCTTCCCTGTCTTGGAGCATCAGACAGACACATCCGATCAACCGTGGGAACCATTATCACAGTGTTGGTTCAGCTCGGAGGAATTTTGGGTTGGCCTGAACTATTGCAGTCCCTTGTAAATTGCTTGGACAGTAATGACTTAAATCACATGGAAGGTGCTATGGATGCTTTATCCAAGATTTGTGAGGACATCCCTCAAGTGCTCGATTCAGATGTACCAGGTTTATCTGAGAGACCCATCAACATATTTCTTCCAAGGTTATTGCAGTTTTTCCAGTCACCACACACATTGTTAAGAAAGCTTTCTTTGGCTTCTGTAAATCAGTACATTATGTTGATGCCCTCTGCCTTATATGTGTCCATGGATAGCTATCTTCAAGGCCTGTTTCTTCTTGCAAATGACCCAGCTTCTGAAGTGCGGAAATTGGTTTGTGCAGCATTTGTCCAGCTGATTGAAGTCCGCCCCTCATTTTTAGAGCCTCATTTGAAGAATGTTATTGAATACATGTTGCAAGTGAACAAGGATACTGCTGATGAAGTGGCTCTTGAAGCTTGTGAATTCTGGTCTGCTTTCTGTGATGCTCAAATACCTCCTGATAACCTACGAGAATTTTTGCCACGTCTGATTCCAGTATTGTTGTCGAACATGGTTTATGCTGATGATGATGAATCACTAATTGAGGCTGAGGATGATGGCTCCCTACCTGACCAGGATCAGGATATTAAACCAAGATTTCATGCATCAAGATTTCACGGGTCTGATGATTTGGAAGATGATGATGATGATGTCGTGAACACTTGGAACTTAAGAAAATGCAGTGCAGCTGCTCTTGATATCCTCTCTAATGTGTTTGGGGATGAAATCCTCCCTACTCTGATGCCTCTTGTTCAGGCCAAGTTGTCTAACACAGATGATGGGTCGTGGAAAGAAAGGGAAGCTGCTGTCCTGGCCCTTGGTGCAATTGGAGAGGGGTGCATCAATGGACTTTATCCTCTTTTACCTGAGATTGTGGCATTTCTTATTCCTCTTCTGGATGATAAATTCCCTCTGATACGGAGCATTTCATGCTGGACTCTCTCTCGATTTAGCAAATTTATTTTTCAGGATATTGGCCATCAGAAAGGCTATGAGCAGTTTGACAAGGTACTTATGGGTCTTCTACGAAGAATTTTGGATGACAATAAGCGGGTCCAGGAAGCAGCATGCTCAGCTTTTGCTACAATCGAAGAGGAGGCGTCAGAAGAGTTGATCCCACGTTTAGAAGTAATATTGAAGCACCTTATGTGTGCTTTTGGAAAATATCAGAGACGGAACCTGAGAATTGTGTATGATGCTATTGGAACTCTAGCAGATGGTGTTGGGGGAGAGCTAAACCAGCCTGCTTATCTAGAGGTTTTGATGCCACCATTAGTGGCAAAGTGGCAACAACTTTCAAATTCAGACAAAGACCTTTTCCCTTTGCTGGAGTGCTTTACATCAATTGCACATGCGTTAGGTCCTGGATTTTCTCAATTTGCTGAACCTGTATTTCAGAGGTGTATAGTTATCATACAGACCCAACAAGTGGCGAAGGTTAATCCTGCTTCAGCAGCCGTTCAATATGACAAAGAGTTCATTGTGTGCTGTCTTGATCTGCTTTCTGGACTTGCAGAGGGCCTTGGCAGTGGAATTGAGAGTTTGGTTTCACAATATGGCTTGAGGGACCTACTTTTGCAATGCTGCATGGATGAGGCTCCAGATGTCCGCCAAAGTGCCTTTGCATTGCTAGGAGATCTTGCAAGAGTATGCCCTATTCATCTCCATCCTCGTTTAGCTGAGTTTCTTGATGTTGCTGCGAAACAATTGGAAACACACAAGCTGAAAGAAACTGTTTCAGTAGCTAATAATGCTTGCTGGGCTATAGGGGAATTAACAGTTAAGGTGCAGAAAGAGATTTCTCCCGTTGTTATGACAGTTGTTTCATGTTTGGTCCCAATTCTTCAGCACGCTGAGGGTCTCAGCAAATCACTAATTGAAAATTGTGCTATCACACTTGGAAGGCTTGCATGGGTTTGTCCAGATCTTGTTTCACCCCATATGGATCATTTTATGCAACCCTGGTGCACTGCTTTGTCCATAATACGTGATGATATTGAGAAAGAGGATGCCTTCCGAGGTCTATGTGCTATGGTTCGAGCAAATCCATCTGGTGGTCTGAGTTCTCTTGTTTATCTGTGTAAAGCTATTGCAAGTTGGCATGAAATACGAAGTGAAGAGCTACACAATGAAGTTTGCCAGGTGTTGAATGGATATAAACAGATGCTAAGGAATGGTGCATGGGATCAGTGTATGTCTGCTCTTGAACCTCCAGTTAAAGACAGGCTTTCAAAATATCAAGTATGA 2682 0.4355 MAAANASWQPQEQGVKEICALLEQQISPAAVAADKSQIWQRLQHFSQFPDFNNYLVFILARAEGKSVEIRQAAGLLLKNTLRTTFKSMLPAYQQYIKAELLPCLGASDRHIRSTVGTIITVLVQLGGILGWPELLQSLVNCLDSNDLNHMEGAMDALSKICEDIPQVLDSDVPGLSERPINIFLPRLLQFFQSPHTLLRKLSLASVNQYIMLMPSALYVSMDSYLQGLFLLANDPASEVRKLVCAAFVQLIEVRPSFLEPHLKNVIEYMLQVNKDTADEVALEACEFWSAFCDAQIPPDNLREFLPRLIPVLLSNMVYADDDESLIEAEDDGSLPDQDQDIKPRFHASRFHGSDDLEDDDDDVVNTWNLRKCSAAALDILSNVFGDEILPTLMPLVQAKLSNTDDGSWKEREAAVLALGAIGEGCINGLYPLLPEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIFQDIGHQKGYEQFDKVLMGLLRRILDDNKRVQEAACSAFATIEEEASEELIPRLEVILKHLMCAFGKYQRRNLRIVYDAIGTLADGVGGELNQPAYLEVLMPPLVAKWQQLSNSDKDLFPLLECFTSIAHALGPGFSQFAEPVFQRCIVIIQTQQVAKVNPASAAVQYDKEFIVCCLDLLSGLAEGLGSGIESLVSQYGLRDLLLQCCMDEAPDVRQSAFALLGDLARVCPIHLHPRLAEFLDVAAKQLETHKLKETVSVANNACWAIGELTVKVQKEISPVVMTVVSCLVPILQHAEGLSKSLIENCAITLGRLAWVCPDLVSPHMDHFMQPWCTALSIIRDDIEKEDAFRGLCAMVRANPSGGLSSLVYLCKAIASWHEIRSEELHNEVCQVLNGYKQMLRNGAWDQCMSALEPPVKDRLSKYQV* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00502 893 ProSiteProfiles Importin-beta N-terminal domain profile. 38 106 IPR001494 GO:0006886|GO:0031267
Pte18g00502 893 SMART IBN_N_2 38 106 IPR001494 GO:0006886|GO:0031267
Pte18g00502 893 Gene3D - 4 893 IPR011989 -
Pte18g00502 893 PANTHER IMPORTIN BETA 16 869 IPR040122 GO:0006606
Pte18g00502 893 Pfam Importin-beta N-terminal domain 39 105 IPR001494 GO:0006886|GO:0031267
Pte18g00502 893 FunFam Transportin-1 5 893 - -
Pte18g00502 893 Pfam HEAT-like repeat 408 461 - -
Pte18g00502 893 SUPERFAMILY ARM repeat 8 886 IPR016024 -
Pte18g00502 893 Pfam HEAT repeat 668 696 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00502 Pte-Chr18 10758891 10770590 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00502 K18752 - tcc:18607499 1543.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00502 18 10758891 10770590 Pte18g00502 18 10758891 10770590 RCT