Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00436 ATGGATTCCTCTTCCACAGTTTCTGGAAGATGGAAAATTTGTGCATTTGCGAGCTTGATATGCAGCCTTCTCCTTATCTTCACTCTCAATCGTGGTTCTGATACAGTAAACCTAACAGTTGTTGAAAACGTACCTGTGGTAGAGGATACTCAGAATAACGGTACTGATCAGATAGCTGCTGTTTCTATCATCCAGTTGCAGAAGCAACCAAAGCCTATATCTGATGTAAGTGTGACAATCGAGGAAACAAACAAGTGTAACATCTTTGATGGCAAATGGGTTTATGATCCCATTACAAGTCCTGCCTATAATGGGAAGCAGTGTCCATTTCTTGGCGATCAAGTAAGTTGTCACATAAATGGTCGTCCTGATTATGAATATGAAAAATGGAGCTGGCAAGCAAATGGGTGTCACATCCCCAGGTTTAATGGTACTGACATGTTAGAGAGACTTAGAGGGAAGAGGTTGATCGTAGTTGGAGACTCTATCAACAGAAATATGTGGGAATCCCTTGTCTGCCTTCTGTACTCATCTGTTGCTCCTTTCACTGCCACAGTTGAAGCATCAAATGGCGCCTACAAGGTCTTCAGATCGAAGGAATATAACTGTTCTGTTGAGTTTCACTGGAGTCCATTTCTTGTTCATCTTAACGTTGACCAAGCAGGAGGTGTAAAACTCATCCTTGACAAAATTGCTCCTGAAGCAAAACTGTGGAGAGGTGCTGACATCATGGTGTTTAACAGTGGTCACTGGTGGGTGCACCGAGGCAAGATCAAAGCGTGGAACAAAATGCAATATGGTGAAAATCTTGTGGAGGACATGGAGATTGGAACAGCTTTCGAAATGGAGTTGAAGACTTGGTCTCAGTGGTTAGACAACAGCGTTAGACACAAACAAAACAAAAATGTTGTTGAGAGAGCACTTGGTAGCATGGCAACACCAGTGAGGTACTTGAACATCACAAAGCTGTCGCAGCATCGAATCGATGCACATCCTGCAGTGTTTTCTATAAGGAACAAGAATCGAACGAAAGAGGCTGACAGTAGTACTGATCGTGAGGCACTAGAGGCAAATGCTGATTGCAACCACTGGTGCTTGCCTGGCGTACCTGATACGTGGAACAGGCTGTTGTATGCATCCCTGGTCCTCGATGGGTCCATAGACACCATGAATATCTCTGACTAG 1185 0.4388 MDSSSTVSGRWKICAFASLICSLLLIFTLNRGSDTVNLTVVENVPVVEDTQNNGTDQIAAVSIIQLQKQPKPISDVSVTIEETNKCNIFDGKWVYDPITSPAYNGKQCPFLGDQVSCHINGRPDYEYEKWSWQANGCHIPRFNGTDMLERLRGKRLIVVGDSINRNMWESLVCLLYSSVAPFTATVEASNGAYKVFRSKEYNCSVEFHWSPFLVHLNVDQAGGVKLILDKIAPEAKLWRGADIMVFNSGHWWVHRGKIKAWNKMQYGENLVEDMEIGTAFEMELKTWSQWLDNSVRHKQNKNVVERALGSMATPVRYLNITKLSQHRIDAHPAVFSIRNKNRTKEADSSTDREALEANADCNHWCLPGVPDTWNRLLYASLVLDGSIDTMNISD* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00436 394 Pfam PMR5 N terminal Domain 85 138 IPR025846 -
Pte17g00436 394 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 299 377 IPR029962 GO:0016413
Pte17g00436 394 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 139 303 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00436 Pte-Chr17 5745882 5747741 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00436 - - cave:132182960 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00436 17 5745882 5747741 Pte17g00436 17 5745882 5747741 RCT