Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00421 ATGCTTTCCCCGAGCAAATTCAAATCTGTAGATTTCTACAGGAAAATTCCGAAAGATCTAACAGAGGCATCCTTATCAGGTGCAGGATTATCCATTATAGCGGCTTTAGCCATGGTGTTTTTATTTGGAATGGAGCTGGATAATTATTTGTCCACAGATACTTCAACATCTGTTACTGTTGACAAAAGTGCTGATGGGGAGTTCTTACTTCTTGATTTCAATATCAGTTTTCCTTCACTATCATGTGAATTCGCGTCCATTGACGTAAGTGATGTGTTGGGAACTAACAGGCTGAATATAACAAAAACAGTCCGTAAGTTCTCTATAGATTCAAATCTGAGACCTGCTGGCTCTGAATTTCACTCATCTACAACGCCAACTATCATCAAGCATGGTGATGATGTAGACGAAGAATCTAGTGTAGGATCTTTTTCACTATCCTCAAGTAATTTTGATAAGTTTACAAGCCTGCATCCCATTTTGGTGGTAAACTTTTTTACTCCTTGGTGCTATTGGAGTCAACGTTTGAAAGCATCATGGGAGAAGGCAGCCAATATAATAAGACAGAGATATGATCCCGAAAAGGACGGACGCATTCTTTTGGGAAAGGTTGACTGTACCAGAGAAAGTGATCTGTGTCGGAGTCATCACATACAAGGGTATCCATCCATCCGAATTTTCCGTAGAGGAAGTGATATAAGAGAAGAACATGGCCACCATGAACATGAATCTTACTATGGAGATCGTGATACAAATAGCCTGGTTAAGACAATGGAAAATTTAGTGACTTCTCTCTCTTCAGAGAATCAAGAGGGTAAATATTCCCTTGAAGCAGAGCATGCAAAAAGGCCAGCACCATCCTCTGGGGGTTGTAGAGTTGAAGGATATGTGCGTGTTAAGAAGGTTCCAGGAAACCTAATAATTTCTGCTCGATCAAATGCGCATTCATTTGATACATCTCAAATGAATTTGTCACATGTTGTAACCCATCTGGCCTTCGGTCGGAAAATCTCACCTGAAATTATGAGCGAAGCACAGCGCTTGATACCTGAAATTGGTGGAAGCCACAACAGATTAGATGGCCATTCATTCATTAACCATCATGAATTCGGAGCAAATGTGACTATAGAGCATTATCTTCAAATAGTTAAAACTGAAGTGATAACTGGTAGAGGTCACGAATTAGTTGAAGAATATGAATACACAGCACACAGCAGTCTGATACAGAGTTTGCACATGCCCGCTGCAAAGTTTCACTTTGAGCTGTCCCCCATGCAGGTTCTAATAATTGAAAATCAGAAATCATTTTCACATTTTATAACAAATGTCTGCGCGATCATAGGAGGCATTTTCACGGTTGCTGGAATATTGGATTCGCTCTTGCACAACACCCTCAAGTTCATGAAAAAGATTGAACTTGGGAAAAACTTTTGA 1434 0.3996 MLSPSKFKSVDFYRKIPKDLTEASLSGAGLSIIAALAMVFLFGMELDNYLSTDTSTSVTVDKSADGEFLLLDFNISFPSLSCEFASIDVSDVLGTNRLNITKTVRKFSIDSNLRPAGSEFHSSTTPTIIKHGDDVDEESSVGSFSLSSSNFDKFTSLHPILVVNFFTPWCYWSQRLKASWEKAANIIRQRYDPEKDGRILLGKVDCTRESDLCRSHHIQGYPSIRIFRRGSDIREEHGHHEHESYYGDRDTNSLVKTMENLVTSLSSENQEGKYSLEAEHAKRPAPSSGGCRVEGYVRVKKVPGNLIISARSNAHSFDTSQMNLSHVVTHLAFGRKISPEIMSEAQRLIPEIGGSHNRLDGHSFINHHEFGANVTIEHYLQIVKTEVITGRGHELVEEYEYTAHSSLIQSLHMPAAKFHFELSPMQVLIIENQKSFSHFITNVCAIIGGIFTVAGILDSLLHNTLKFMKKIELGKNF* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00421 477 Pfam Endoplasmic reticulum vesicle transporter 285 458 IPR012936 -
Pte17g00421 477 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
Pte17g00421 477 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 476 IPR045888 -
Pte17g00421 477 ProSiteProfiles Thioredoxin domain profile. 114 263 IPR013766 -
Pte17g00421 477 Pfam Thioredoxin 145 243 IPR013766 -
Pte17g00421 477 CDD PDI_a_family 150 258 - -
Pte17g00421 477 Gene3D Glutaredoxin 132 284 - -
Pte17g00421 477 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Pte17g00421 477 FunFam Protein disulfide-isomerase 5-4 131 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00421 Pte-Chr17 5490423 5495624 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00421 - - qsa:O6P43_000842 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00421 17 5490423 5495624 Pte17g00421 17 5490423 5495624 RCT