Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00416 ATGATTGTGGTTGCTTCTGAAGAAACGGTGATCCTTGTATTCTGGGTTGTTGCTATTTTGGTTTCTTTGGTTCTGGGGATGAAGAATGATGGCCAGAAGCAACAGCAAGGAGGTGTGCCTCGCTCCGGCAGGAGCAACGGCTTTATTCCCAGTTCATTCCGTGCTATTTCAAGCTACTTGAGGATTGTTTCTTCGGGTGCTTCAACTGTTGCAAGGTCAGCCGCGTCGGTGGCATCCTCAATTGTGGAAAGGGACGATGATACCAACCATGATCAGGTTATCTGGGCTGGATTTGACGAGTTATACTGTGATGGAGAACTTTCTCGGAAGGTTCTCCTTTTGGGCTATCGATCTGGTTTTCAAGTCTGGGATGTTCAAGATGCTGATGATGTCCGTGACTTGGTTTCAATACACTGTGGTCCTGTTTCTTTCATGCAAATGCTTCCTAAACCACTAGCATCGAAGACGTCAGATAATAAGTTTGCAGACTGTCGCCCACTTCTGGTTGTTTGTATGGATGGCTCATGTTTTGGTACTACTAGTATTCAAAATGGGAACATTTCTAACAATGGAGGTGCTTCAAACTGCCATGACCAAGGGAATGGCAATGTTATGCCAACAATTGTTCAATTCTACTCTTTGAGGTCTCAATCTTATGTTCATGTCCTAAAATTCAGATCAGTTATTTACTCTGTAAGGTGCAGTTCACGAGTTGTTGCTATTTCCCAAGCAACTCAGATACACTGTTTTGATGCGACAACATTAGAGAGGGTATATACTATAATCACAAATCCTATAAGCGTGGGATGTCCTGGTTCCGGAGGTATAGGTTATGGACCTCTTGCAGTGGGTCCAAGATGGCTGGCTTACAGTGGAAATCCAGTTGCAGTTTCCAATCCTGGGCGTGTGAGTCCACAACATTTAACACCTTCTGCAAGTTTTCCTGGTTTTTCTTCAAATGGAAGCCTTGTTGCACACTATGCTAAAGAATCAAGCAAACAACTTGCGGCTGGGATTGTAACCCTCGGAGACATGGGTTATAAGAAGCTTTCCAGATATTGCTCTGAGCTTTTACCTGATAATAATAATAATTCATTGCAGACTGGAAATCCTGTCTTGAAGGCCAATGGAGCCATAAATGGCCATTCAATTGATAATGATAGTGTTGGAATGGTCATTGTTAGAGATATCATTAGCAAAACTGTGATTGCTCAGTTCAGGGCCCACAAAAGTCCAATTTCAGCATTATGCTTCGATCCTAGTGGTACCCTTTTAGTGACAGCTTCTGTTAAGGGACATAACATAAATGTATACAAGATAATGCCTGGGTATTCTGGAAGTTCTTCTTCATCGGATGCTGGTCCTTCTTATATACATCTTTACAGGCTGCAACGTGGCCTTACAAATGCAGTCATACAGGACATAAGTTTCAGTGATGATAGCAACTGGATTATCATCAGTTCTTCAAGGGGCACTAGCCATCTGTTCGCCATAAACCCGTCTGGAGGATTTGTAAATATTCAGTCTGATGCTGGTAATTTAACTCCAAAAAGTAATGGATTTGGTGTCATGACTAAGCCCACAGTTCGTTGGCCACCAAATTCAGCTACACAGGTATCTCGTCAGCAAAGCTTGATCACTGCTGGTCCTCCATTGACACTTGCAGCCTTGAGCAGAATTAGGAATGGTAGTAATGGCTGGAAAGGCTCTGTCACTGGTGCTGCTGCAGCTGCAACTGGCAGGGCGAGTCCTAGTTTGGGGGCAATTGCTTCATGTTTCCACAATTGCAGAGGGGATCCTTTTTTTGTTGATTCCAAGGCAAAGTACCACATGTTGGTTTTCTCACCAACTGGTTTTATGATACAATATGTGCTGTGTATATCTAATGATCTAGATTCAAGGGTGGTTTCTGAATTAGCCCCTGCTTATGAATCGGCTTTTGACAATGATGCAAGATTAGTAGTTGAGGCGATCCAAAAATGGGGTATATGTCAGAGAAGCAACCGAAGGGAGCGAGAAGATACCATTGATATATATGGTGATAATGGGATTTCTGATAGTGGTAAGATATATCCTGAGGAAATGGAAAGGGGGAATAGTATTAGTTCCGAAACAAGGAAAACTACCATTAAAGCAAGTCCCAGTTCCGAGGAAAAGCTTCATTTGTATATTGCAGAAGCTGAATTGCAGATGCATCAAGCTAGGAACCCACTATGGGCAAAGCCTGAGATATACTTTCAGTCAATGATAGAGGGAATTGAAACGGATGATGGAACTGCTCCAGAGGGAGAATTTGAAATTGAAAGGATCCCTACTTGCATGATAGAAGCTAGATCAAGAGATCTTGTTCCTGTGTTTGACTATGCTCAGACCCCAAAAATCCAGAAAACCAGGGCTTCTGCTCTAGATAGCAAGAACAATGCACAACTGGTGCATCAGAATTCTTGGCTGTCTGAAAATGGAGTTTTGCCTAGGAGTAGCTCTATGTCTTCTCATTGTATGCGAAATTCGAGTGACGAAACATCTGAGTTTCAAAGTGGCTTTGAAGGAAATGGGTGGTATAATCCACAATTGCTAGTAGATCTTAAGGATTCTGTAAATACCAATGACATCCCTAAAACAAATACTCTGCTTGAGATTGTAAATAATAGGGAGAGCTTAGAAGCAGAGGCTCAGCTCAAGCTTGTAAATAACGACATAGAAGGACTAGAGATGGAGAACTGTTCCGGAGATGGAAGTGGTGAATTTGATTAG 2754 0.4245 MIVVASEETVILVFWVVAILVSLVLGMKNDGQKQQQGGVPRSGRSNGFIPSSFRAISSYLRIVSSGASTVARSAASVASSIVERDDDTNHDQVIWAGFDELYCDGELSRKVLLLGYRSGFQVWDVQDADDVRDLVSIHCGPVSFMQMLPKPLASKTSDNKFADCRPLLVVCMDGSCFGTTSIQNGNISNNGGASNCHDQGNGNVMPTIVQFYSLRSQSYVHVLKFRSVIYSVRCSSRVVAISQATQIHCFDATTLERVYTIITNPISVGCPGSGGIGYGPLAVGPRWLAYSGNPVAVSNPGRVSPQHLTPSASFPGFSSNGSLVAHYAKESSKQLAAGIVTLGDMGYKKLSRYCSELLPDNNNNSLQTGNPVLKANGAINGHSIDNDSVGMVIVRDIISKTVIAQFRAHKSPISALCFDPSGTLLVTASVKGHNINVYKIMPGYSGSSSSSDAGPSYIHLYRLQRGLTNAVIQDISFSDDSNWIIISSSRGTSHLFAINPSGGFVNIQSDAGNLTPKSNGFGVMTKPTVRWPPNSATQVSRQQSLITAGPPLTLAALSRIRNGSNGWKGSVTGAAAAATGRASPSLGAIASCFHNCRGDPFFVDSKAKYHMLVFSPTGFMIQYVLCISNDLDSRVVSELAPAYESAFDNDARLVVEAIQKWGICQRSNRREREDTIDIYGDNGISDSGKIYPEEMERGNSISSETRKTTIKASPSSEEKLHLYIAEAELQMHQARNPLWAKPEIYFQSMIEGIETDDGTAPEGEFEIERIPTCMIEARSRDLVPVFDYAQTPKIQKTRASALDSKNNAQLVHQNSWLSENGVLPRSSSMSSHCMRNSSDETSEFQSGFEGNGWYNPQLLVDLKDSVNTNDIPKTNTLLEIVNNRESLEAEAQLKLVNNDIEGLEMENCSGDGSGEFD* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00416 917 Gene3D - 103 515 IPR015943 GO:0005515
Pte17g00416 917 SUPERFAMILY WD40 repeat-like 109 499 IPR036322 GO:0005515
Pte17g00416 917 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 38 844 IPR045142 GO:0006914
Pte17g00416 917 Pfam Breast carcinoma amplified sequence 3 549 784 IPR022175 -
Pte17g00416 917 SMART WD40_4 399 439 IPR001680 GO:0005515
Pte17g00416 917 SMART WD40_4 216 251 IPR001680 GO:0005515
Pte17g00416 917 SMART WD40_4 456 497 IPR001680 GO:0005515
Pte17g00416 917 Coils Coil 886 906 - -
Pte17g00416 917 Pfam WD domain, G-beta repeat 404 433 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00416 Pte-Chr17 5433532 5440685 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00416 - - qlo:115955563 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00416 17 5433532 5440685 Pte17g00416 17 5433532 5440685 RCT