Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00395 ATGGCGCTACTTCAGGCTTGTATCAGTGGTAAACTCCGCCCAATCTCTTCATTCTCTCTCCTACCTCTCGTACCTAGCTTTGTATTTGCTTCTTCATCTTCATCTTTATCTTCAATGGCCACCTACAAACTATCGGCCTCTTTTTGTACTACTACTCAACATAACCTGCCTGTCCACAACTCCGAGTTCCGCTGGAAGCCCATGTGTTTATACTACACACAGGGCAAGTGCACCAAGATGGATGACAATATCCATATGCAAAGGTTTAATCACGATTGCTCTTGGGAATTCCAAAGGAACCTCAAAGAAACAAAGAATTTGTGCTCACAGAATTTGGACTTCTTCCTGGTTCTGGATTTGGAGGGTAAGGTAGAGATTCTTGAGTTTCCAGTTCTTATAGTTAATGCAAAAACAATGGAAGTTGAAGATATTTTCCACAGGTTTGTTAGGCCCACAAAAATGAGTGAGCAAAGAATAAATGAATACATTGAAGGGAAATATGGAAAATTTGGCGTTGATCGCGTTTGGCACGATACTGCCATACCATTCAAGGAAGTTATTCAAGAGTTTGAAGCTTGGTTAGTTAAGCGTAAATTGTGGACCTCAGAACGAGGTGGCAATCTTTCTGGAGCTGCATTTGTCACTTGTGGAAATTGGGATTTGAAAACAAAGGTTCCTCAGCAATGTGAGGTTTCAAAGATACGCCTTCCTCCATACTTTATGGAGTGGATTAATTTGAAAGATGTCTACCTAAATTTTTATAACAGGAAGGCAACAGGAATGATGCCAATGATGAAGCAACTACAAATACCTTCGTGGGGAAGTCATCATCTTGGTATTGATGATACAAAAAACATAGCAAGAGTCTTGCAGCACATGCTGGCTGATGGGGCTCTCATGCAGATTACCGCTAGAAGGAAAAAGAGTACGCCGGGGAATGTTGAATTTTTGTTCAAGAATCGAATAATATAG 972 0.4074 MALLQACISGKLRPISSFSLLPLVPSFVFASSSSSLSSMATYKLSASFCTTTQHNLPVHNSEFRWKPMCLYYTQGKCTKMDDNIHMQRFNHDCSWEFQRNLKETKNLCSQNLDFFLVLDLEGKVEILEFPVLIVNAKTMEVEDIFHRFVRPTKMSEQRINEYIEGKYGKFGVDRVWHDTAIPFKEVIQEFEAWLVKRKLWTSERGGNLSGAAFVTCGNWDLKTKVPQQCEVSKIRLPPYFMEWINLKDVYLNFYNRKATGMMPMMKQLQIPSWGSHHLGIDDTKNIARVLQHMLADGALMQITARRKKSTPGNVEFLFKNRII* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00395 323 Gene3D - 102 320 IPR036397 GO:0003676
Pte17g00395 323 Pfam Exonuclease 119 290 IPR013520 -
Pte17g00395 323 SMART exoiiiendus 114 299 IPR013520 -
Pte17g00395 323 CDD ERI-1_3'hExo_like 115 294 IPR047201 GO:0000175
Pte17g00395 323 PANTHER 3'-5' EXONUCLEASE ERI1-RELATED 51 322 - -
Pte17g00395 323 FunFam Uncharacterized exonuclease domain-containing protein At3g15140 100 321 - -
Pte17g00395 323 SUPERFAMILY Ribonuclease H-like 109 297 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00395 Pte-Chr17 5124165 5128743 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00395 - K18418 qsa:O6P43_029139 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00395 17 5124165 5128743 Pte17g00395 17 5124165 5128743 RCT