Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00387 ATGTCAGAAACTGAAAGTCCAAAGAACAACACCATATGTTTCGTCGATACACCATTGTTAGATGTGCATGATGATCAAGGACAGCAAAGAAACCGTGTGGGTCGGTGGATGGAGAAAGTGGTGGACATGGTGGAGGTCAAAGAACAAATCAACATCTCAGTACCAATGATGCTTACCAGTGTTTTCTATTACTTAATCACTTTGGTTTCTGTCATGTTTGCTGGTCATCTCGGTGAGCTTCAGCTTGCAGGTGCCACCCTTGCAAATTCTTGGGCTACTGTCACTGGTTTTGCCCTCATGATTGGAATAAGTGGGGCACTAGAGACATTATGTGGACAAGGGTTTGGTGCAAGAGAGTACAGAATGTTGGGGATTCATCTCCAAGCATCGTGCTTCATATCAGTTCTCTTCTCCGGAGTAGTTTCCATCCTTTGGCTTTATACAGAGACCATACTGGTCTTGCTTCATCAGGATCATGAAATCTCGAAGGTTGCTGCTTTGTATGTGAAGTTTCTCATCCCAGGCTTATTTGCTTATGGTATCCTTCAATGTATCATGAGGTTTCTTCAAGCACAATCAGTTGTGATGCCGCTGGTTTTGCTCTCAGTTGCACCATTGATACTTCATTTTGGTATAACATATTCCTTAGTCAATTGGACATCTCTTGGCCTCAAAGGAGCTCCATTGGCAGCTTCTCTTTCATTATGGATTTCAGTATTGGTTTCAGTGTTATTTGTCGTTTGTGCTAAGAAATTTAAGCAGACATGGGAAGGGCTTTCAACAGAGTGTTTCAGTTATATCCTCAGCAACTTGAAACTAGCTCTGCCATCAGCAGCAATGGTATGTTTGGAGTACTGGGCCTTTGAGATATTGGTCTTCTTAGCTGGACTGATGCCAGACTCGGAGATCAGTACTTCACTGATTGCAATGTGTGTGAACACAGAAACCATTGCCTATATGATCATTTGTGGTCTCAGTGCAGCTGCCAGCACAAGGGTATCCAATGAATTAGGAGCAGGGCATCCAACTCGGGCGAAAAATGCCATGGCTATGTCTATCAAGCTCTCCCTTCTGTTTGCTTTCTTTGTTGTATTATTACTTGTATTGGGAAATAGTGTATGGGCTCATTTCTTTAGTGACAATCTCATTATCATACATAAGTTTACTTCCATGACACCTTTCCTAGCAATATCCATACTCCTTGATTCAATTCAAGGTGTTTTATCAGGTGTAGCCAGAGGATGTGGTTGGCAGCATCTAGCTGTGTGTGTAAACCTTTCTACGTTTTACCTTATTGGGGTACCAATTGCTTGTCTCCTTGGATTTAAGCTCAGACTATTTGTTAAGGGTTTATGGATGGGCTTAATTTGTGGTCTCTCCTTACAAGCTGCTTCTCTTTTTCTGATCACAAAACGCGTTGCGTGGACAAAACTGAATCTCTAA 1443 0.422 MSETESPKNNTICFVDTPLLDVHDDQGQQRNRVGRWMEKVVDMVEVKEQINISVPMMLTSVFYYLITLVSVMFAGHLGELQLAGATLANSWATVTGFALMIGISGALETLCGQGFGAREYRMLGIHLQASCFISVLFSGVVSILWLYTETILVLLHQDHEISKVAALYVKFLIPGLFAYGILQCIMRFLQAQSVVMPLVLLSVAPLILHFGITYSLVNWTSLGLKGAPLAASLSLWISVLVSVLFVVCAKKFKQTWEGLSTECFSYILSNLKLALPSAAMVCLEYWAFEILVFLAGLMPDSEISTSLIAMCVNTETIAYMIICGLSAAASTRVSNELGAGHPTRAKNAMAMSIKLSLLFAFFVVLLLVLGNSVWAHFFSDNLIIIHKFTSMTPFLAISILLDSIQGVLSGVARGCGWQHLAVCVNLSTFYLIGVPIACLLGFKLRLFVKGLWMGLICGLSLQAASLFLITKRVAWTKLNL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00387 480 PANTHER MULTIDRUG RESISTANCE PROTEIN 43 475 - -
Pte17g00387 480 NCBIfam MATE family efflux transporter 55 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte17g00387 480 CDD MATE_eukaryotic 45 477 IPR045069 GO:0042910|GO:1990961
Pte17g00387 480 Pfam MatE 276 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte17g00387 480 Pfam MatE 55 214 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00387 Pte-Chr17 5026007 5028647 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00387 K03327 - qsa:O6P43_029117 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00387 17 5026007 5028647 Pte17g00387 17 5026007 5028647 RCT