Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00331 ATGATGAAGCCTTCGATTCTCAGATCTGTACGCTCGGCTCTTGGTCAGGGTTCCTCTTACACTGCCAGGCGTGGCTATTCAGGTGATTCAGTTCCCAGCCGAAAGGTCACAATTTTGGGTGCAGCTGGTAGGATCGGTGAGTATCTCTTTCTTATTATGAGGAGCAATCCTCTCGTCTCCCAACTGGCCCTCTATGATATTGAAGGAACTCGAGCTGTAGCTTCTGAAGGGAGACATTTTTACAGCACTGAGGTTGTTGGATACGATGGCGCGGACAACCTTGGAAAAGCATTAGAGGGTTCAGATGTGGTGATTATTGCAGCTGGTGTGTCTAGAAAACCTGGGATGACTCGTGATGATGTATTCAACATTAATACGGTCAGAGCTGAAAGAGTAACTCTTGACTTAGTCAGAGCTAAATACTACGATGCCAGAGTGGCTGGAGTCCCAGTAGGTTGTGTTGTCTATTTTATGCATTACTGTTGTCAAAAGATAGTGTTATATTTGCATCTGATTTCAATAAACTTGCAGACAGGGTTCATATTTGCCCAGGCTTGCCTCAAGGACCTTAATGGGGATCCAGATGTAATTGAATACTCATTTGTGCAATCCACTGTTACGGAATTGCCCTTCTTTGCTACCAAGGTGAGACTTGGGAAGAATGGCGTGGAGGAAGTTTTTGGCCTGGGTCCTCTGAATGATTTCGAGCAAGAAGGCCTGCAGAAGTTAATACCAGAGCTCAAGGCATCTATTGAGAAAGGAATCAAGTTCGCCAAAGAGAATAATTTGTTGAACTCAATATTTTCCAGAGGCTGA 816 0.4461 MMKPSILRSVRSALGQGSSYTARRGYSGDSVPSRKVTILGAAGRIGEYLFLIMRSNPLVSQLALYDIEGTRAVASEGRHFYSTEVVGYDGADNLGKALEGSDVVIIAAGVSRKPGMTRDDVFNINTVRAERVTLDLVRAKYYDARVAGVPVGCVVYFMHYCCQKIVLYLHLISINLQTGFIFAQACLKDLNGDPDVIEYSFVQSTVTELPFFATKVRLGKNGVEEVFGLGPLNDFEQEGLQKLIPELKASIEKGIKFAKENNLLNSIFSRG* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00331 271 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 181 257 IPR022383 GO:0016616
Pte17g00331 271 Pfam lactate/malate dehydrogenase, NAD binding domain 35 127 IPR001236 GO:0016491
Pte17g00331 271 Gene3D - 27 167 - -
Pte17g00331 271 SUPERFAMILY LDH C-terminal domain-like 181 259 IPR015955 GO:0003824|GO:0016616
Pte17g00331 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 149 IPR036291 -
Pte17g00331 271 Gene3D - 173 260 IPR015955 GO:0003824|GO:0016616
Pte17g00331 271 PANTHER MALATE AND LACTATE DEHYDROGENASE 22 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00331 Pte-Chr17 4376317 4378757 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00331 K00026 - qsa:O6P43_001022 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01243 1 33575463 33637675 Pte17g00331 17 4376317 4378757 RCT
Pte17g00331 17 4376317 4378757 Pte17g00331 17 4376317 4378757 RCT