Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00301 ATGGGAAAAGCAGGAAGCTCCAACTTGAACATTGCTATAATCCATCCTGATCTTGGCATAGGTGGAGCTGAGAGACTAATAGTTGATGCAGCTGTTGAACTTGCTTCTCATGGTCACAATGTTCATATCTTCACTGCACACCATGACAAAAATAGATGCTTTGAGGAGACGGTTTCTGGTGCATTTCCAGTCACAGTATATGGAGCTTTCCTGCCCAGACATTTATTCTACCATTTTCACGCACTCTGTGCATACTTAAGGTGCCTGTTTGTTGCTCTCTGTGTGGTTTTTATGTGGCAATCTTTTGACGTTGTACTGGCAGATCAAGTCTCAGTGGTCATTCCTGTTTTGAAACTCAAAAAATCAACAAAGGTTATATTCTATTGTCATTTTCCAGACTTGTTGCTTGCTCAGCATACTACTACTCTTAGAAGGATATATAGGAAACCAATAAACTACATAGAAGAGATAACAACGGGAATGGCGGATTTGATACTGGTTAATAGCAATTTTACACGGTCTACTTTTGCACACACTTTCAAGCGTCTTAATACACGAGGTATTCAGCCAGCTGTGCTATACCCAGCAGTGAATGTAGATCAGTTTGATGAGCCAAGTTCATATAAGTTAAATTTTCTATCTATAAATCGGTTTGAAAGGAAGAAGAATATGGAACTGGCAATATCTGCTTTTGCAATGCTTTACCATAGTCAAGAAAATGGTCACGGGGATGATAATAATGATGCAACAAACGCTTCCCTGACCATTGCAGGTGGCTATGATGAACGATTGAGGGAGAATGTTGAATACTTTGAAGAGCTTAAAAGTTTAGCAGAAAAGGAAGGAGTTTCCAATAAGATACACTTCATCACATCTTGCTCCACAGCTGAGAGGAATCTCCTTCTATCAGAGTGCTTATGCGTACTCTATACTCCAAAAGATGAGCACTTTGGTATTGTTCCTTTGGAGGCAATGGCAGCTCACAAACCTGTCATTGCCTGCAACAGTGGAGGACCTGTTGAGACAATCGAGAATGGTGTGACAGGATTCCTTTGTGACCCTACTCCACATGAGTTTTACTCAGCGATGGCTCAACTTGTAAAATATCCCCAGCTAGCAGAACAAATGGGCAGAGAAGCCCGGCAACATGTTGCAGAGTTGTTCTCTACAACAATATTCGGGCAGCGCTTGAATAGATATGTGGTTGACATTGCCAGAGGAAAACTAGATTAG 1233 0.412 MGKAGSSNLNIAIIHPDLGIGGAERLIVDAAVELASHGHNVHIFTAHHDKNRCFEETVSGAFPVTVYGAFLPRHLFYHFHALCAYLRCLFVALCVVFMWQSFDVVLADQVSVVIPVLKLKKSTKVIFYCHFPDLLLAQHTTTLRRIYRKPINYIEEITTGMADLILVNSNFTRSTFAHTFKRLNTRGIQPAVLYPAVNVDQFDEPSSYKLNFLSINRFERKKNMELAISAFAMLYHSQENGHGDDNNDATNASLTIAGGYDERLRENVEYFEELKSLAEKEGVSNKIHFITSCSTAERNLLLSECLCVLYTPKDEHFGIVPLEAMAAHKPVIACNSGGPVETIENGVTGFLCDPTPHEFYSAMAQLVKYPQLAEQMGREARQHVAELFSTTIFGQRLNRYVVDIARGKLD* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00301 410 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 6 406 IPR027054 GO:0004378|GO:0006486
Pte17g00301 410 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 6 204 - -
Pte17g00301 410 CDD GT4_ALG2-like 9 397 - -
Pte17g00301 410 Gene3D Glycogen Phosphorylase B; 206 388 - -
Pte17g00301 410 Pfam Glycosyltransferase Family 4 20 200 IPR028098 -
Pte17g00301 410 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 205 389 - -
Pte17g00301 410 Gene3D Glycogen Phosphorylase B; 9 205 - -
Pte17g00301 410 Pfam Glycosyl transferases group 1 211 382 IPR001296 GO:0016757
Pte17g00301 410 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00301 Pte-Chr17 4057397 4062292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00301 1 404 Glycosyltransferase AT1G78800 74.752 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00301 K03843 - gmx:100800839 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00301 17 4057397 4062292 Pte17g00301 17 4057397 4062292 RCT