Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00015 ATGGCTTTCTGGGGTGTTGAAGTGAAACCCGGAAAGCCTTTTACTCATAAGTTTGACGAAGTGAAAGGACGGCTTCATATTTCAATGGCAACCTTGGGGTTTGGCTCTGATACAACCAAAAGTATCCTCCAATGTAATGTTGGAAACAAGAGTCCTATTTATTTGTGCTCTCTGTATCCTGGAAGCAATGAATCATTGCAGCTGAATTTGGAATTTGAAGAGGCTGAAGATGTTATCTTGTCTGTGATCGGTCCACGTAGCTTTCACCTGTCTGGTTTTTTTCTGCGAGGAAGAAAGTCTGGCATAAATGATGATGAAACAGAATCCTATGGGGAAGATATTGCAAATACAGAGACTGAGAGATCACTATGCAGTGATGAAGACGATTATGAGGACAGTTTTATTAATGATGATGAAGTGGAAGTCTTCCCACCTACTCCCATTTCCTCTGGAGAAGAGAAAGTCTCAGCTCATAAAAAGCCAAAGAGAAAGAAGGGTAGTCGTCGTCGACTTGTAAGGAAATCCCGCATGATTGAATCAGAAGAAGAGGGAAGCCCTGACAAAAAAGTGGCTGTTAACGTGAGCAAGGATGATCTGATAGAAGGACATGATGAAGATAGATTTGCTATTTCTTCCCTTGGAAAAAAGAGATTGGATGTGAAGGTATCACAACTAGAATTAGGGGACAAAGATAATGAAGGAACCAATGGTAATAACAGCAACAACAAAGCTGTAGAGAGCAAAAGTGAAGTTGCCCAACCAAATTTAAACGAATACAATACTCTTCCAGATGTTCAGAAAGAAAGTTCCATGCTAAAATGGGAAACGGAGTCAAGGCAGATAATCTCACTTCCTTTGGAAGGGACTAGCTTTGAGAGTGGTGAAAAAGCAATGGAGAAAAAGGAAGAGTGGAAGATGGTAGAGAAGATACTAAATGAAATAAATTCTGATCCTATAAACGCCATTGAAATGGTGACAGCAAAGCAACCTGAATCCAATGCTAAGGACTTGGTGAATGTTCTGCCTGTGGAAAATGAACACCATCTAAATAATATCGAGCTTCAAAATACTATCTCGGTTCAAAATGCTGAGATGGGTCTCCAAATGAAAAGGAATACCAAGAAAAAGATGGCAGAACATAAAAGAGCAACACCAGTTTTGGAAGGTGCTGCTGCTGCTGACGAAGCTATTGGCACAAAGGATAAAGACCAGGAAAATGTGGCTATGGAAGGTTACATCACCTTTGATGTCAATGAAGATTATGATGGACAGCAGAAGATAATCAATGAGAACAGTGACTTTGAGCTTGCTGATAATTTATCACATCCAAGTGATGCAATGGGTTCTCAAATGAATGAAAATACAAAGAAAAGCAAGAAAAGGAAAGAACAGGAAAAATCTATTGCATCTTTGGAAGGAGATGCCAGTGCAGTGGATAAATCCAAGGAAAATGGGGCAAAGGTTGATGATGTGGTTGTTGCAGAAGATGGTGAAGAAAAGAAGTCAATTATCTTAAAAAAAGTGGATGCTGGAGTTCTCCTCCTTTCTGATGGAAAATTATCTGATAGTAAGGAATCCAAGAAAAAGAAGAAAAAGCGCAAAACCATGGAAAATACAGATAATGTCAATAAGGATATTCCTGATCCTTCAGCAGAGCAAAAAGCCATCTACATGGAGGAAGATGAGGACAAGGTTGCTGATGCGGAACCTTCTAAAGTCGAGGTGTCATTGAGTGACCTTGTTATTGAAGAGATAAAAGCAGGGAAACTAGATAGCAAAATTGCCGAGTCTGGTAAAAAGGTCAGTATCTATTACACTGGAAGGTTGCAAAGCAGTGGTGCATTATTTGACTCGAATGTGGGGGATGCTCCATACAAGTTTCGCCTTGGTAGAAATAAAGTCATAAAGGGTTGGGATGTTGGTATTGAAGGTATGCGAGTTGGAGAAAAGAGAAGACTGACTATTCCACCGCCAATGGGGTTTGGCCCTGAAGGGGATGGTGAAAACATACCACCAAACGCATGGGTGGTATATGAGATTGAATTGGTGAAAGTTCATTGA 2061 0.4022 MAFWGVEVKPGKPFTHKFDEVKGRLHISMATLGFGSDTTKSILQCNVGNKSPIYLCSLYPGSNESLQLNLEFEEAEDVILSVIGPRSFHLSGFFLRGRKSGINDDETESYGEDIANTETERSLCSDEDDYEDSFINDDEVEVFPPTPISSGEEKVSAHKKPKRKKGSRRRLVRKSRMIESEEEGSPDKKVAVNVSKDDLIEGHDEDRFAISSLGKKRLDVKVSQLELGDKDNEGTNGNNSNNKAVESKSEVAQPNLNEYNTLPDVQKESSMLKWETESRQIISLPLEGTSFESGEKAMEKKEEWKMVEKILNEINSDPINAIEMVTAKQPESNAKDLVNVLPVENEHHLNNIELQNTISVQNAEMGLQMKRNTKKKMAEHKRATPVLEGAAAADEAIGTKDKDQENVAMEGYITFDVNEDYDGQQKIINENSDFELADNLSHPSDAMGSQMNENTKKSKKRKEQEKSIASLEGDASAVDKSKENGAKVDDVVVAEDGEEKKSIILKKVDAGVLLLSDGKLSDSKESKKKKKKRKTMENTDNVNKDIPDPSAEQKAIYMEEDEDKVADAEPSKVEVSLSDLVIEEIKAGKLDSKIAESGKKVSIYYTGRLQSSGALFDSNVGDAPYKFRLGRNKVIKGWDVGIEGMRVGEKRRLTIPPPMGFGPEGDGENIPPNAWVVYEIELVKVH* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00015 686 MobiDBLite consensus disorder prediction 158 172 - -
Pte17g00015 686 MobiDBLite consensus disorder prediction 523 551 - -
Pte17g00015 686 Gene3D Nucleoplasmin core domain 1 99 - -
Pte17g00015 686 MobiDBLite consensus disorder prediction 225 256 - -
Pte17g00015 686 MobiDBLite consensus disorder prediction 454 469 - -
Pte17g00015 686 FunFam Peptidyl-prolyl cis-trans isomerase 572 686 - -
Pte17g00015 686 Gene3D - 548 686 IPR046357 GO:0003755
Pte17g00015 686 MobiDBLite consensus disorder prediction 173 189 - -
Pte17g00015 686 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 685 - -
Pte17g00015 686 MobiDBLite consensus disorder prediction 437 453 - -
Pte17g00015 686 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 598 686 IPR001179 GO:0003755
Pte17g00015 686 SUPERFAMILY FKBP-like 570 685 - -
Pte17g00015 686 MobiDBLite consensus disorder prediction 229 256 - -
Pte17g00015 686 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Pte17g00015 686 MobiDBLite consensus disorder prediction 437 482 - -
Pte17g00015 686 MobiDBLite consensus disorder prediction 140 189 - -
Pte17g00015 686 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 593 683 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00015 Pte-Chr17 236997 245047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00015 596 683 Calmodulin-binding Proteins AT5G48570 44.944 7.38e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00015 K14826 - cave:132187127 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00015 17 236997 245047 Pte17g00015 17 236997 245047 RCT