Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01333 ATGTGTAATCCCGAGCAATCTTCAGCATCCTCATTTCTGTGTTCTGAAAACACAAAAGCATATCTCATTAATAGCAATAAAGTCATGGATTCATCTCTTGATGATCAAGAAGAAGATCAGCTTCATAGATGGCCAACTACAAAAGAGGCACTGGAAGAAATCAAAGCCATAGGCAAGGTCTCAGCCCCAACCACTGTGACTGGTTTAATCCTCTATTCAAGAGCGATGATCTCCATGCTTTTTCTTGGGTACCTTGGTGAGCTTGAGCTTGCCGGAGGTTCCCTTTCCATTGGTTTTGCAAATATCACGGGCTACTCTGTTATCTCTGGATTGGCAATGGGGATGGAACCTATATGCGGCCAAGCTTATGGAGCCAAGCAAATGAAGCTGCTAGGATTGACTCTTCAAAGAACAGTGCTTCTTCTGTTCGCAACTTCCATACCTATCTCTTTCATTTGGTTGAACATTAAGAGAATTCTCTTACAGTGTGGCCAAGACGAAGAAATCTCCTCGGTGGCGCAAAGTTTCATTCTTTTCTCCATTCCAGACCTTTTCTTTCTTTCCCTTCTTCACCCTTTGAGAATATACTTGAGAACTCAGAGTATCACATTGCCATTAACATATTGCTCAGCCCTCTCTGTTTTGCTTCATGTCCCCCTGAATTTCTTGCTAGTAGTTCAATTCAAGATGGGAATAGCCGGGGTGGCCATAGCAATGGTTTGGACTAACCTTAATCTCTTTCTTTTCCTTTCTTCTTTCATATATTTCTCTGGGGTGTACAAGGATTCATGGGTTTCTCCAAGCATGGACTGCCTCAAAGGATGGTCATCTCTGTTAGCACTGTCTATTCCAACCTGCATTTCAGTCTGCCTTGAATGGTGGTGGTATGAGTTTATGATCTTGCTCTGTGGACTTCTAGCCAATCCCAAAGCAACGATTTCTTCCATGGGAATCCTTATCCAAACCACTTCTTTGGTTTACGTCTTCCCATCATCTCTAAGCCTTGGTGTGTCCACAAGGGTCGGGAATGAACTGGGAGCCAACAGACCAAGAAAAGCGCGGATCTCCATGATAGTTTCTCTTCTCTGTGCAGTAGCTTTAGGCCTAGGGGCGATGTTGTTCACCACTTTGATGAGACATCAATGGGGTCGGTTTTTCACCAGTGACGAAGAAATTCTGGAGTTGACGGCAATCGCATTGCCAATTGCCGGCCTCTGTGAGCTTGGGAACTGTCCACAAACCACAGGTTGTGGAGTTTTGAGAGGGAGTGCTAGGCCTACCATTGGAGCAAACATCAATCTGGGGTCGTTTTATCTTGTAGGCATGCCAGTGGCCATGTTCATGGGGTTTGTGCTGAAAATAGGATTTGCTGGATTGTGGCTTGGGTTGCTTGCTGCACAAGCTTCCTGTGCCTTACTCATGGTGGTTGTTCTTTGCAGAACTGATTGGATGGTTCAAGCTGAAAGAGCAAGACAACTAACAAAATCTTCAATTCCTGCTGCTACGAATAGTAGCAGTTCGTCGCCAATATACTCTAAAGCTGAGATCAAGATGGACAAAGATGGTCATCATCTTGAAGAGATAATATGCATTAATGATGAGCCAATGAAGTCACCAAACTCACATGAAACGGACCCCCTCCTATCCAATCCAGTACACACTGCAAAATATTAA 1674 0.4421 MCNPEQSSASSFLCSENTKAYLINSNKVMDSSLDDQEEDQLHRWPTTKEALEEIKAIGKVSAPTTVTGLILYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQMKLLGLTLQRTVLLLFATSIPISFIWLNIKRILLQCGQDEEISSVAQSFILFSIPDLFFLSLLHPLRIYLRTQSITLPLTYCSALSVLLHVPLNFLLVVQFKMGIAGVAIAMVWTNLNLFLFLSSFIYFSGVYKDSWVSPSMDCLKGWSSLLALSIPTCISVCLEWWWYEFMILLCGLLANPKATISSMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPRKARISMIVSLLCAVALGLGAMLFTTLMRHQWGRFFTSDEEILELTAIALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAMFMGFVLKIGFAGLWLGLLAAQASCALLMVVVLCRTDWMVQAERARQLTKSSIPAATNSSSSSPIYSKAEIKMDKDGHHLEEIICINDEPMKSPNSHETDPLLSNPVHTAKY* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01333 557 CDD MATE_eukaryotic 53 489 IPR045069 GO:0042910|GO:1990961
Pte16g01333 557 PANTHER MULTIDRUG RESISTANCE PROTEIN 47 483 - -
Pte16g01333 557 Pfam MatE 63 223 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte16g01333 557 Pfam MatE 284 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte16g01333 557 MobiDBLite consensus disorder prediction 534 557 - -
Pte16g01333 557 NCBIfam MATE family efflux transporter 75 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01333 Pte-Chr16 32818453 32820979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01333 K03327 - qsu:111988266 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01333 16 32818453 32820979 Pte16g01333 16 32818453 32820979 RCT