Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01312 ATGTACAATGCTTTGGTTTCAGAGCTCGAGAACAACGACAACAATTTGCCAGTAGTCTACTCTCCAGTTCCATTGGAGCATTCTTCCCTTCATCTCTTACTAATTGATTTGAGAATTGTCTTTGTGAATTGTTTATCAATGGATGTGAAGAAAGAGAACCACAATAACATGATCTTCGATATATTCTTACAGATCGGTCTAATTCTCGTTATGGTGTTCATGTTCTTGTTCATGCACAATATTCCTCAGAAGCTTTTCTCTAGGCTTCGTATCCGATCACGATCTGATATACAAGCCAAACGCCACTTTGTTCTCGGAGCTCAGCTCTTGGCTCGAGCTAGATCCGCTAAGACTCGATCCAACGCTAATTCCTTGGCCAACGAAGCCATTGCAGAAGCCGACAAAGCGATCGCACTGAATCCTAAGGATGCCGCCGCTTACTTACTCAAAGCACTTTGTCTTGAGCTTCAAGGCTTTAGGACTTCAGCTCTTGAGTCGATTGATACGGCGTTGTCCCCCATGGCAGTGAAGTCGTTGAGTGATAAGGAGAAAGGCGACGCGCTTTTCAAGAGAGCTGAGTTGAAGATGGCAATGAATCGGCCTGGTGGACTACTGGACTCAGTGGTCGACGATTTGAATGAGTCGCTGAAGCTGAGTTCTGGTAATGCCAAAGCCTTTTGTTTGTTAGGTGAATATTATGAGGTGAAGAAGATGAAGGAGGAGGCTAAGAAAGCTTTCGAGGAAGCTCTGAAAGTTGACACAGAGTTAATGTCAGCTCGAATGGGATTGGACAGGTTAGAGTCCTCGTGA 810 0.4469 MYNALVSELENNDNNLPVVYSPVPLEHSSLHLLLIDLRIVFVNCLSMDVKKENHNNMIFDIFLQIGLILVMVFMFLFMHNIPQKLFSRLRIRSRSDIQAKRHFVLGAQLLARARSAKTRSNANSLANEAIAEADKAIALNPKDAAAYLLKALCLELQGFRTSALESIDTALSPMAVKSLSDKEKGDALFKRAELKMAMNRPGGLLDSVVDDLNESLKLSSGNAKAFCLLGEYYEVKKMKEEAKKAFEEALKVDTELMSARMGLDRLESS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01312 269 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 6 127 260 - -
Pte16g01312 269 Gene3D Tetratricopeptide repeat domain 102 176 IPR011990 GO:0005515
Pte16g01312 269 Gene3D Tetratricopeptide repeat domain 177 269 IPR011990 GO:0005515
Pte16g01312 269 SMART tpr_5 223 256 IPR019734 GO:0005515
Pte16g01312 269 ProSiteProfiles TPR repeat profile. 223 256 IPR019734 GO:0005515
Pte16g01312 269 SUPERFAMILY TPR-like 127 253 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01312 Pte-Chr16 32644148 32647687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01312 - - csav:115695146 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01312 16 32644148 32647687 Pte16g01312 16 32644148 32647687 RCT