Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01273 ATGAGAAGGTTCCGCTGGTTACCCCAAAGGCTGCGGCGGTGCCTTCGGCATTTCACTTCATCGGCGGCTTCAAAAACGCTCGCTGACGCTGAATTCTTCTCTTCGTGCCGGCAATCATTGCTTCACACACGAGTGTTGCACAGCTGCAGATTCGGTATTGGTACACATGATGATTTAGCAACTTCCAGATTACCATTCGGATACCGAGATATGCATTCAGCAGGATCTGCTTATCGAGACTATTACAAAATTCTTGGTGTCCCTGAGAATGCTAGTCAGGATGAAATTAAGAAGGCGTATTATGCCCTTGCTAAGAAGTACCATCCAGATGCGAATAAGAATTATCCATATGCGAAAAGAAAGTTCCAAGATATAAGAGAAGCTTATGAGATCTTACAAGATACCGAGAAGAGGGCACAATTTGATAGGATGAAGACACGAGTCCATGGTTCAGAGAACATTGAATATGATCCCAGTGATGCTGAGAGATTTAGAAATGCTTTCCGTTCTCAATTTTCTGACTCCTTCCATAGAGTATTTTCTGAGATCTTTGAAGAAGAAAGTCATCGTACTTCACCACAAATTGAGGTTGAATTGTTACTGTCTTTCTGGGAAGCTGTGAAGGGATGCACTAAAAATTTGACTTTTGATGCACTTATTCCATGCGACTCTTGCGGTGGTAGTGGATATCCACGCAATGCTAAGGCAAAAGTATGTCCAACTTGTAGAGGCCTCGGGAGGGTTACTATTCCTCCGTTTACGTCAACATGCATTACTTGTAAAGGAGAAGGCCATGTCGTCAAGGAAAAATGTAGTTCTTGTCTGGGCTCAGGGGTTGTTGATGGTGTTAAAGAGGTCAAGGTTACAATACCGGCAGCAGGAGTGGACTCTGGAGATGTAATAAATGTGCCAGAAGCAGGTCATGCAGTCAAGCATGCAGGTCAATCAGGGAACTTGTACATCAAAATAAAGGCACAGTCTTTATTCAATTATCTCTCTCCATCTCTATCTCACTCACAAGTTTCTGAAGATCCTCTTTTCACCAGAGATGGTGCTGATATCTATGTGGAGTCTAATATTAGCTTTACGCAAGCTATTCTTGGTGGCAAGGTTGAAGTGCCTACATTGTCAGGACAGATGCAAGTAAAAATACCTAAAGGTGTACAACCAGGACAGCTGCTTACTTTAAGAGGCAAAGGACTACCTAAACATGGTGTTTGGGTAGATCATGGAGATCAGTATGTGCGCTTCCGTATTAACTTTCCGACGGCAATCAATGAACGCCAACATGCTATACTAGAAGAACTTGCAAAGGAGGAGATAAATTATGAAAATAGCATTTCGTTTGATGAAAGTTGGTGA 1362 0.4258 MRRFRWLPQRLRRCLRHFTSSAASKTLADAEFFSSCRQSLLHTRVLHSCRFGIGTHDDLATSRLPFGYRDMHSAGSAYRDYYKILGVPENASQDEIKKAYYALAKKYHPDANKNYPYAKRKFQDIREAYEILQDTEKRAQFDRMKTRVHGSENIEYDPSDAERFRNAFRSQFSDSFHRVFSEIFEEESHRTSPQIEVELLLSFWEAVKGCTKNLTFDALIPCDSCGGSGYPRNAKAKVCPTCRGLGRVTIPPFTSTCITCKGEGHVVKEKCSSCLGSGVVDGVKEVKVTIPAAGVDSGDVINVPEAGHAVKHAGQSGNLYIKIKAQSLFNYLSPSLSHSQVSEDPLFTRDGADIYVESNISFTQAILGGKVEVPTLSGQMQVKIPKGVQPGQLLTLRGKGLPKHGVWVDHGDQYVRFRINFPTAINERQHAILEELAKEEINYENSISFDESW* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01273 453 Gene3D - 343 449 - -
Pte16g01273 453 Pfam DnaJ central domain 222 278 IPR001305 GO:0031072|GO:0051082
Pte16g01273 453 Gene3D - 218 251 - -
Pte16g01273 453 Gene3D - 252 286 - -
Pte16g01273 453 ProSitePatterns Nt-dnaJ domain signature. 122 141 IPR018253 -
Pte16g01273 453 PRINTS DnaJ domain signature 82 100 IPR001623 -
Pte16g01273 453 PRINTS DnaJ domain signature 100 115 IPR001623 -
Pte16g01273 453 PRINTS DnaJ domain signature 117 137 IPR001623 -
Pte16g01273 453 Pfam DnaJ C terminal domain 195 422 IPR002939 -
Pte16g01273 453 SUPERFAMILY HSP40/DnaJ peptide-binding domain 190 325 IPR008971 GO:0006457|GO:0051082
Pte16g01273 453 ProSiteProfiles dnaJ domain profile. 80 145 IPR001623 -
Pte16g01273 453 CDD DnaJ_zf 222 278 IPR001305 GO:0031072|GO:0051082
Pte16g01273 453 FunFam Chaperone protein dnaJ 1, mitochondrial 342 448 - -
Pte16g01273 453 ProSiteProfiles Zinc finger CR-type profile. 209 283 IPR001305 GO:0031072|GO:0051082
Pte16g01273 453 Hamap Chaperone protein DnaJ [dnaJ]. 77 453 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte16g01273 453 Gene3D - 194 324 - -
Pte16g01273 453 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 209 280 IPR036410 -
Pte16g01273 453 SUPERFAMILY Chaperone J-domain 77 172 IPR036869 -
Pte16g01273 453 Gene3D DnaJ domain 77 193 IPR036869 -
Pte16g01273 453 SUPERFAMILY HSP40/DnaJ peptide-binding domain 347 433 IPR008971 GO:0006457|GO:0051082
Pte16g01273 453 CDD DnaJ 80 134 IPR001623 -
Pte16g01273 453 CDD DnaJ_C 195 423 - -
Pte16g01273 453 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 37 440 - -
Pte16g01273 453 SMART dnaj_3 79 137 IPR001623 -
Pte16g01273 453 Pfam DnaJ domain 80 142 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01273 Pte-Chr16 32376057 32381885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01273 80 177 Miscellaneous Gene Families AT1G16680 32.353 4.60e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01273 - - qsa:O6P43_006211 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01273 16 32376057 32381885 Pte16g01273 16 32376057 32381885 RCT