Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01263 ATGGAACCCTCGAGTGCCTTCATGTTTGGTCTAATTTTGACTATCAATATGATCATACCAAGCGCAGCAACAGATTACATTGTCGGAGACTCATCAGGTTGGACCATGGGAGCTGATTACAGCACCTGGACTAGTGACAAGACCTTTGTTGTTGGCGATAACCTAGTTTTCAATTATGGGGGTGGGCACACTGTTGACGAAGTTACTGACAGCGACTACAACACTTGCACAGTAGGAAATTCCATCAGTACGGACAGCAGTGGCGCTACAACCATTTCTCTGAAAAATCCTGGGACTCGTTACTTCATTTGCGGTATTCCTGGACATTGTGGAAGCGGCATGAAACTTGCTGTCAATATCAAGGCAGCAGCAGCAGGAGGCAATACTGCACCAACGGGGACGACACCTTCTTCAGACAAGGGCTTACCTTCGGGAACGAATACAAATACCAACCCCACCACTACCACCAATGCAATCCCAACTAAGACACCTTTCACCATGTCAAATTACTCTGCAGGGTTGACCATATCTCCAGCTATAGCTATGTCAGTTGTTGGTTTCATGTCTTTGTGCTTGTTGGCTCTGTTTTGA 591 0.4636 MEPSSAFMFGLILTINMIIPSAATDYIVGDSSGWTMGADYSTWTSDKTFVVGDNLVFNYGGGHTVDEVTDSDYNTCTVGNSISTDSSGATTISLKNPGTRYFICGIPGHCGSGMKLAVNIKAAAAGGNTAPTGTTPSSDKGLPSGTNTNTNPTTTTNAIPTKTPFTMSNYSAGLTISPAIAMSVVGFMSLCLLALF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01263 196 MobiDBLite consensus disorder prediction 127 160 - -
Pte16g01263 196 PANTHER BLUE COPPER PROTEIN 23 134 IPR039391 GO:0009055
Pte16g01263 196 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Pte16g01263 196 CDD Phytocyanin 24 120 - -
Pte16g01263 196 MobiDBLite consensus disorder prediction 128 160 - -
Pte16g01263 196 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Pte16g01263 196 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Pte16g01263 196 Gene3D - 22 126 IPR008972 -
Pte16g01263 196 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Pte16g01263 196 FunFam Blue copper 22 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01263 Pte-Chr16 32286369 32287489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01263 11 127 Miscellaneous Gene Families AT1G22480 52.991 4.10e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01263 - - qsa:O6P43_015340 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01263 16 32286369 32287489 Pte16g01263 16 32286369 32287489 RCT