Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01245 ATGTCGAGGCCTCTACAAAGAGGTATATCTGGGATGCGGAACTCCGGTGGAAGCCAGGCTCTGTGGGACTCTCAATTCAAAGACAAAACAGAGAATGGAGATATTGATAAAAGAGGTTCTTTAGAACAGAGCCCTCTGGCATTCAAGTTTCCTCTGCTTTTATCATTTCCAGATAAAACTAATGCCAAGCATGTTTTAACTGAGAGTGGATATTTTTCTGATCCCTTCAGTATCGGCAGTCCAAGAAGTCGACATAAAATAATGATGTTCATTTTGAAGTTTAATTTAGTACTGATAGCTCTCCTTGCTCTTGCCGGTTCTTTTATGTGGGCAATTTCGATTTCAACTTTATCAAGAGGTCAGATTTTTCATGGTTATAGACGCCTCCAACAGAAACTTGTGTCTGATCTTCTAGATATTGGGGAGCTTTCTTACTCTGTAAAATCAAAAGAACTGGAATTCTGTGTTGATGAGTATGAAAACTATGTTCCCTGCTACAATAATTCGGATAATGGCAGTGAGGTTCTGCGGCAATGTGGGTTGGAGCCAAAGCAAAATTGTTTAGTTCTTCCACCTGTGAAGTACAAGATTCCTCTCAAGTGGCCTACTGGCAGAGACGTCATCTGGGTTTCAAACGTTAAGATTACTGCACAGGAGGTTCTTTCTTCTGGAAGTTTCACTAAAAGGATGATGATGCTGGAGAAAGAGCAAATAACATTTGGTTCAGCCTCTCTTATATTCGATGGAATTGAAGATTATTCTCATCAAATTGCAGAAATGATTGGGTTAAGGAATGAATCTTATTTCATACAGGCCGGGGTGAGAACCATTCTCGACATTGGTTGTGGCTATGGTAGCTTCGGGGTGCACCTCTTCTCTAGTCAGCTATTGACTATGTGTGTTGCAAATTATGAGTCTTCAGGCAGCCAAGTTCAACTGACACTTGAGAGGGGCCTGCCTGCCATGATTGGCTCAATTTCATCGACTCAGTTGCCTTTTCCACTTTTGTCCTTTGATATGCTGCATTGCGCACGTTGTGGCATTGATTGGGATGAAAAAGATGGCATCCTCTTGGTTGAAGCTGATAGGCTTTTAAAGCCAGGTGGATACTTTGTCTGGACATCGCCCCTAACAAGCACTGCCAAGTTCTTCCGTAACAAAGAGAATCAGAAAAGGTGGAACTTTATTCGTGAATATGCAGAAAATATCTGCTGGGAAATGTTGTCGCAACAGGAAGAAACTGCTGTGTGGAGAAAAACAACCAAGAGAAGTTGCTATACAGCACGAAGGCCTGGTATGGGACCTTCTTTATGCAGCAAAGGGCATGATGTGGAAACTGCCTATTATCATCCACTTGAAAGCTGCCTTACTGGAACTCGCTCTAACAGATGGATTCCTATTGAAGAGAGAACCCATTGGCCTTCCCGGGCTGCATTGAATAACAAGGAACTTGCAATATATGGTTTGCAGTCTGATGAATTTGTTGAGGACTCCGAGAACTGGAGGACTGCAGTTATCAATTATTGGTCTCTTCTATCACCTTTGATCTTCTCAGATCATCCAAAGAGGCCAGGTGACGAAGAGCCTTCACCTCCTTACAACATGCTCAGGAATGTGCTGGACATGAATGCTCATTTCGGCGGTTTTAATTCTGCACTATTAAATACTGGAAAGAATGTGTGGGTGATGAATGTAGTCCCGATAACAGCACGTAATCATCTCCCAATGATTCTGGACAGGGGCTTTGTTGGTGTGTTGCATGATTGGTGTGAAGCTTTTCCAACATATCCTAGAACTTATGATTTGGTGCATGCTGATGGGCTTCTGTCTCTTGAAGATGGTCTGCACCGATGCTCCATGTTTGATATATTCACCGAGATAGATCGGTTACTTCGTCCAGAGGGCTGGGTGATAATCCGTGACACTGCTGATTTAGTAGACTCAGTAAGAGCTATTCCAGCATTGCTGAAGTGGGATGCGAGAATTGCAGAAATCGAAAGGAACAGCGACGAGAAACTCATGATCTGTCAGAAGCCTTTCTTTAAGAGACAAATAAGCTAA 2061 0.4275 MSRPLQRGISGMRNSGGSQALWDSQFKDKTENGDIDKRGSLEQSPLAFKFPLLLSFPDKTNAKHVLTESGYFSDPFSIGSPRSRHKIMMFILKFNLVLIALLALAGSFMWAISISTLSRGQIFHGYRRLQQKLVSDLLDIGELSYSVKSKELEFCVDEYENYVPCYNNSDNGSEVLRQCGLEPKQNCLVLPPVKYKIPLKWPTGRDVIWVSNVKITAQEVLSSGSFTKRMMMLEKEQITFGSASLIFDGIEDYSHQIAEMIGLRNESYFIQAGVRTILDIGCGYGSFGVHLFSSQLLTMCVANYESSGSQVQLTLERGLPAMIGSISSTQLPFPLLSFDMLHCARCGIDWDEKDGILLVEADRLLKPGGYFVWTSPLTSTAKFFRNKENQKRWNFIREYAENICWEMLSQQEETAVWRKTTKRSCYTARRPGMGPSLCSKGHDVETAYYHPLESCLTGTRSNRWIPIEERTHWPSRAALNNKELAIYGLQSDEFVEDSENWRTAVINYWSLLSPLIFSDHPKRPGDEEPSPPYNMLRNVLDMNAHFGGFNSALLNTGKNVWVMNVVPITARNHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHADGLLSLEDGLHRCSMFDIFTEIDRLLRPEGWVIIRDTADLVDSVRAIPALLKWDARIAEIERNSDEKLMICQKPFFKRQIS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01245 686 FunFam probable pectin methyltransferase QUA2 236 420 - -
Pte16g01245 686 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 155 678 IPR004159 GO:0008168
Pte16g01245 686 MobiDBLite consensus disorder prediction 1 20 - -
Pte16g01245 686 Gene3D Vaccinia Virus protein VP39 243 432 IPR029063 -
Pte16g01245 686 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 146 681 IPR004159 GO:0008168
Pte16g01245 686 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 193 381 IPR029063 -
Pte16g01245 686 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 497 644 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01245 Pte-Chr16 32124454 32129258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01245 K23870 - qsa:O6P43_015317 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01245 16 32124454 32129258 Pte16g01245 16 32124454 32129258 RCT