Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01220 ATGGACGGCATAATGAACAAGCTTAGGAACCTAGACGCCTATCCTAAAATCAACGAAGATTTCTACAGCCGTACACTCTCCGGTGGCGTCATCACCATCGCCTCCTCCGTCGTCATGCTCTTGCTTTTCATATCGGAGCTCCGATTGTATCTTCATTCCGTGACGGAGACACAACTTGTAGTAGATACGTCCAGAGGGGAAACTCTACGAATCAATTTTGACGTTACTTTTCCTGCACTGCCATGCTCCATACTCAGTCTTGACGCAATGGATATCAGTGGGGAGCAGCATCTCGATGTCAAACATGACATAGTCAAGAAAAGATTGGATCCGCATGGTAATGTAATCGAAGCAAGACAGGATGGAATCGGTGCACCCAAGATTGAAAAGCCATTACAAAGACATGGAGGCAGACTTGAACACAATGAGACATACTGCGGCTCTTGTTATGGTGCAGAAGCGTCAGATGATGATTGTTGTAATTCTTGTGAAGAAGTACGTGAAGCCTATAGAAAGAAAGGTTGGGCAATGTCAAACCCAGACTTGATTGACCAGTGCAAAAGAGAAGGCTTCCTACAGAGAATCAAAGATGAAGAAGGCGAAGGTTGTAATATTTATGGTTTCTTAGAAGTAAATAAAGTAGCAGGGAACTTCCATTTTGCTCCTGGGAAAAGCTTCCAACAGTCAGGTGTACATGTCCATGACCTGCTAGCTTTTCAAAAGGAATCTTTTAATGTAAGCCACAAAATCAACAGATTAACTTTTGGAGAGTATTTCCCTGGTGTTGTAAATCCTCTGGACAGCGTACATTGGACACAAGAAATGCCTAGTGCAATGTATCAATACTTTATAAAGGTTGTGCCTACTGTATACACTGATGTAAGTGGGCACACGATACAATCAAACCAGTTCTCTGTGACTGAACATTCCAGAGGTGCAGATGTTGGTCGTCTTCAAGCCCTTCCTGGTGTCTTCTTCTTTTATGACCTTTCTCCAATTAAGGTTACTTTCACTGAGGAACATATTTCATTCCTGCATTTTCTCACCAATGTGTGTGCCATAGTTGGAGGAGTTTTCACTGTTTCAGGAATCCTAGATTCTTTTATATACCATGGTCAAAAGGCAATTAAAAAGAAGATGGAAATCGGCAAATTCAGTTAA 1161 0.4203 MDGIMNKLRNLDAYPKINEDFYSRTLSGGVITIASSVVMLLLFISELRLYLHSVTETQLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIVKKRLDPHGNVIEARQDGIGAPKIEKPLQRHGGRLEHNETYCGSCYGAEASDDDCCNSCEEVREAYRKKGWAMSNPDLIDQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKESFNVSHKINRLTFGEYFPGVVNPLDSVHWTQEMPSAMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHSRGADVGRLQALPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKAIKKKMEIGKFS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01220 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Pte16g01220 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Pte16g01220 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 385 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01220 Pte-Chr16 31934487 31939520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01220 K20367 - pop:7486609 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01220 16 31934487 31939520 Pte16g01220 16 31934487 31939520 RCT