Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01179 ATGCGTGAAGCGCGGTTGATGTGTGATCATTCCAATGAATCTGTTATAGCTCACAAGAAGAAGAAATCAAAGGAAGAACAAGATAAGGTAGAGAAAGAGACCCAGAAGGCGTTGGAGGTTGTTCTGACTTCGCCAGTGGTGGTTGCTGGTCGGAGTCGATCTCAAGGTGCACTCAGGAGGGTGACACCGACAACGCTGGCTCTGAATCCGCCGCACGCGGCGAGTGCCAGAGAGAAGTCATTACCAAACGGGGATCTTTACGTAGGGAGTTTCTCTGGGAAAGTACCTGATGGGTCGGGCAAGTATTTGTGGACTGACGGGTGCATGTATGAAGGTATTTGGAGGAGAGGAAAGGCTTGTGGGAAAGGCAAGCTATTGTGGCCTTCTGGGGCTACCTACGAAGGGGAGTTCAAATCGGGTCGTATGGAAGGGTTTGGTACTTTCATTGGATCCGATGGGGACTCCTACCGAGGCTCTTGGAACTCTGACCGAAAACATGGGATTGGCCGGAAAAAGTATGCTAATGGAGATTTCTACGAGGGCTCCTGGAAGAAGAATCTACAAGACGGGCAAGGCCGGTATGTGTGGAAGAATGGGAATGAGTATGTAGGTGAGTGGAAGAACGGCGTTATTTTCGGTAGAGGTGTGTTGATTTGGGCTAATGGGAATCGATATGAAGGGCAATGGGAAAACGGAGTTCCAAAAGGTAACGGGATTTTCAGCTGGCCAGACGGGGGTTGCTATATTGGAAGTTGGTCTAAAGATATGAAAATGCAGCGGTTAACTGGTGCTTGTTATCCTGGTAGTGGAAAAGAGCAATTTTTGAAGAGCAACGGGCCATTTATGGGCCTCAATAACTGTACTCTGATGTTGGGGAATAGGTCCTCCGTTGATTCTGGTAGATGGAGCTTGACTGAGAAGACTTTCCCTAGGATTTGTATATGGGAATCGGATGGAGAAGATGGTGATATTACTTGTGATATCGTGGATAATGTGGAGGCTTCTATGTTCTACAGAGATGGGAACAGATTAGGTTGCCGTGAGATTAAACAGTTTAGGACAAACACTAGTTGTTTCTCTGGTGAAGTGAAAAAACCTGGACAGACCATCTCCAAAGGACACAAGAACTATGAGTTGATGCTTAATTTGCAATTGGGTATAAGGTACTCTGTTGGAAAGCATGCAACTTCAATGTTGCGAAAGCTTCAGCCAAGAAATTTTGATCCCAAAGAAAAATTCTGGACAAAATTTCCCCCGGAAGGGTCAAAAACAACTCCACCCCACCAATCTGTGGAGTTCCGGTGGAAAGATTACTGCCCTATGGTCTTCAGACATTTGAGGGAGCTATTTCAGGTTGATCCTGCTGATTACATGTTGGCTATTTGCGGGGATGACGCCCTGAGAGAGCTATCTTCTCCTGGGAAGAGTGGTAGCTGTTTCTACCTTACTCAAGATGATAGATTTATGATAAAGACGGTGAAAAAGTCAGAAGTCAAGGTACTTCTCCGGATGCTTCGAAGTTACTATGATCATGTTTTCCGTTATGAAAATTCCCTGGTTACAAAATTTTTTGGAGTTCATTGTGTCAAACCAATAGGTGGCCCCAAGACAAGGTTCATTGTGATGGGCAATCTTTTCTGCTCCGATTATCGGATCCATAGACGTTTTGACTTGAAAGGATCTTCACATGGACGCACCACGGATAAACCCGAGGGAGAGATCGATGAAACTACCACCCTCAAGGACCTTGATCTAAATTTTGTATTTCGATTACAAAAGAACTGGTTCCAGGATCTCATTCAGCAAATAGAATGTGACTGTGAGTTCTTAGAAGCTGAGAGAATAATGGATTACAGTATTTTGGTTGGCCTTCACTTCCGTGAGAATACATATGATAAGATGGGATTGTCACCATTTGTCTTGCGCACAGGCAAGAAGGATTCCTATCAAAATGAAAAATTCATGCGAGGCTGTCGTTTTCTTGAGGCAGAATTGCAAGATATGGATCGAGTGTTAGCTGGCAGGAAGTCGTTGATTAGGCTAGGAGCCAACATGCCAGCTAGAGCTGAGCGAATGGCAAGGAGGAGTGATTTTGATCAGCATCCTATAGGTGGTGGAGTCAGCCATTTCATCCCCTCTCGAAGTGGGGGGGAGGTCTATGAAGTAGTCCTATATTTTGGAATCATAGACATCCTGCAAGATTATGACATCACCAAGAAGTTAGAGCATGCATACAAATCATTTCAAGCTGATCCTACTTCAATATCAGCAGTTGACCCGAAGCTGTATTCAAAGAGGTTCCGTGATTTCATAGGCAGAATCTTCATCGAAGACAGGTAG 2340 0.45 MREARLMCDHSNESVIAHKKKKSKEEQDKVEKETQKALEVVLTSPVVVAGRSRSQGALRRVTPTTLALNPPHAASAREKSLPNGDLYVGSFSGKVPDGSGKYLWTDGCMYEGIWRRGKACGKGKLLWPSGATYEGEFKSGRMEGFGTFIGSDGDSYRGSWNSDRKHGIGRKKYANGDFYEGSWKKNLQDGQGRYVWKNGNEYVGEWKNGVIFGRGVLIWANGNRYEGQWENGVPKGNGIFSWPDGGCYIGSWSKDMKMQRLTGACYPGSGKEQFLKSNGPFMGLNNCTLMLGNRSSVDSGRWSLTEKTFPRICIWESDGEDGDITCDIVDNVEASMFYRDGNRLGCREIKQFRTNTSCFSGEVKKPGQTISKGHKNYELMLNLQLGIRYSVGKHATSMLRKLQPRNFDPKEKFWTKFPPEGSKTTPPHQSVEFRWKDYCPMVFRHLRELFQVDPADYMLAICGDDALRELSSPGKSGSCFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYDHVFRYENSLVTKFFGVHCVKPIGGPKTRFIVMGNLFCSDYRIHRRFDLKGSSHGRTTDKPEGEIDETTTLKDLDLNFVFRLQKNWFQDLIQQIECDCEFLEAERIMDYSILVGLHFRENTYDKMGLSPFVLRTGKKDSYQNEKFMRGCRFLEAELQDMDRVLAGRKSLIRLGANMPARAERMARRSDFDQHPIGGGVSHFIPSRSGGEVYEVVLYFGIIDILQDYDITKKLEHAYKSFQADPTSISAVDPKLYSKRFRDFIGRIFIEDR* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01179 779 Gene3D - 545 775 - -
Pte16g01179 779 Pfam MORN repeat 87 109 IPR003409 -
Pte16g01179 779 Pfam MORN repeat 156 177 IPR003409 -
Pte16g01179 779 Pfam MORN repeat 110 131 IPR003409 -
Pte16g01179 779 Pfam MORN repeat 202 224 IPR003409 -
Pte16g01179 779 Pfam MORN repeat 179 200 IPR003409 -
Pte16g01179 779 Pfam MORN repeat 225 246 IPR003409 -
Pte16g01179 779 Pfam MORN repeat 133 154 IPR003409 -
Pte16g01179 779 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 82 186 - -
Pte16g01179 779 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 173 261 - -
Pte16g01179 779 FunFam Phosphatidylinositol 4-phosphate 5-kinase 117 161 - -
Pte16g01179 779 FunFam Phosphatidylinositol 4-phosphate 5-kinase 362 544 - -
Pte16g01179 779 Coils Coil 16 36 - -
Pte16g01179 779 SMART PIPK_2 403 776 IPR002498 GO:0016307|GO:0046488
Pte16g01179 779 Gene3D - 209 273 - -
Pte16g01179 779 Gene3D - 162 208 - -
Pte16g01179 779 Gene3D - 112 161 - -
Pte16g01179 779 SMART morn 85 106 IPR003409 -
Pte16g01179 779 SMART morn 154 175 IPR003409 -
Pte16g01179 779 SMART morn 177 198 IPR003409 -
Pte16g01179 779 SMART morn 131 152 IPR003409 -
Pte16g01179 779 SMART morn 108 129 IPR003409 -
Pte16g01179 779 SMART morn 223 244 IPR003409 -
Pte16g01179 779 SMART morn 200 221 IPR003409 -
Pte16g01179 779 SUPERFAMILY SAICAR synthase-like 372 775 - -
Pte16g01179 779 PIRSF PIP5K_plant 18 282 IPR017163 GO:0005524|GO:0016308
Pte16g01179 779 PIRSF PIP5K_plant 280 779 IPR017163 GO:0005524|GO:0016308
Pte16g01179 779 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 375 775 IPR002498 GO:0016307|GO:0046488
Pte16g01179 779 CDD PIPKc_AtPIP5K_like 376 774 - -
Pte16g01179 779 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 96 775 IPR023610 -
Pte16g01179 779 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 462 773 IPR002498 GO:0016307|GO:0046488
Pte16g01179 779 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 362 544 IPR027484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01179 Pte-Chr16 31554361 31559169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01179 32 778 Acyl Lipid Metabolism Gene Families AT1G21980 72.570 0.0 1103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01179 K00889 - qsa:O6P43_015227 1289.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01179 16 31554361 31559169 Pte16g01179 16 31554361 31559169 RCT