Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01178 ATGTTTCCCCGGATGTCCAACGGTGAACTTATGGCTCCCTTGGACTATGTTACTGTTTCGACTGACAAATTGAGGCAGAGGCTCTTGGAAGAAGGGGTGAGTGAGGTGGCCATTCAGGATAGTGAACAGATCATGAGGAGCGAGTTTTTAGCTTTGCAGAATCAGCTTGTTCTTCTCAAACAGAAGCAGGGGATGCTCATGGACACTCTGCGCCACTTAGAGACAGAAAAAGTCGACCTGGAGAATACAGTTGTTGATGAGAGTCAAAGACAAACCATTGATCAAGGTGCTTCCTCTGCATTACGGCAGGAAAAATTCAGCGAATTAAGCGCAAGCGACTCTGAGGATGACAATGAGAGAGTTGATGCTGTAGAGGAGGAAACAGATGAGGAGGAGAATGCATTCTTTGACACCCGTGATTTTCTCTCCTCCAGTTCTTTCAAAAGTAATGGATCAGATTTTAGGATGTCTTCATTCTCTTCAGATGGTGAAGGGCTTGATGCAGTTGAATCTGAAGATGAAGTTGATACTTCAATTAGATCTGTCGGAACAAACTATCCCTATGTAAAGCGGCGCAAGAAATTGCCTGACCCTGTTGAAAAGGAGAAAAGTGTTAGTCTTTGGTCATTGATAAAGGACAACATTGGGAAGGATCTTACAAAAATATGTCTTCCTGTTTATTTCAATGAGCCTCTCTCCTCTCTCCAAAAATGTTTCGAGGACTTGGAGTATTCATATCTTATTGACAGTGCATACAAATGGGGTATACAGGGTGATAGCTTGATGAGGATTCTCAATGTGGCTGCTTTTGCAATATCTGGATATGCTTCAACTGGAGGAAGAATTTGCAAACCATTTAATCCTTTGTTAGGGGAAACATATGAAGCTGATTACCCGGATAAAGGACTTCGATTTTTTTCAGAGAAGGTTAGTCATCATCCCATGATTGTTGCCTGCCACTGTGAGGGTACCGGTTGGAAATTTTGGGCCGATAGCAATTTAAAGAGCAAATTTTGGGGTCGCTCCATTCAGCTTGATCCTGTTGGTGCTTTGACTTTGGAGTTTGATGATGGGGAAGTTTTTCGGTGGAGTAAGGTTACAACGTCGATATATAACCTCATATTGGGGAAGTTGTACTGTGATCATTATGGCACTATGAGAATAGAAGGAAATCGTGAATATTCATGTAAACTGAAGTTCAAGGAACAATCTATCATTGATCGAAACCCTCACCAGGAGTGGCAAAACGGTTGCAACTCTATTTGGAAAATGGGATGA 1278 0.4218 MFPRMSNGELMAPLDYVTVSTDKLRQRLLEEGVSEVAIQDSEQIMRSEFLALQNQLVLLKQKQGMLMDTLRHLETEKVDLENTVVDESQRQTIDQGASSALRQEKFSELSASDSEDDNERVDAVEEETDEEENAFFDTRDFLSSSSFKSNGSDFRMSSFSSDGEGLDAVESEDEVDTSIRSVGTNYPYVKRRKKLPDPVEKEKSVSLWSLIKDNIGKDLTKICLPVYFNEPLSSLQKCFEDLEYSYLIDSAYKWGIQGDSLMRILNVAAFAISGYASTGGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWADSNLKSKFWGRSIQLDPVGALTLEFDDGEVFRWSKVTTSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRNPHQEWQNGCNSIWKMG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01178 425 SUPERFAMILY Oxysterol-binding protein-like 201 411 IPR037239 -
Pte16g01178 425 FunFam Oxysterol-binding protein-related protein 2A 292 418 - -
Pte16g01178 425 Gene3D - 292 417 - -
Pte16g01178 425 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 18 412 IPR000648 GO:0008289
Pte16g01178 425 Coils Coil 70 90 - -
Pte16g01178 425 MobiDBLite consensus disorder prediction 89 129 - -
Pte16g01178 425 Coils Coil 114 134 - -
Pte16g01178 425 MobiDBLite consensus disorder prediction 89 107 - -
Pte16g01178 425 Pfam Oxysterol-binding protein 206 409 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01178 Pte-Chr16 31533496 31541251 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01178 K20456 - jre:108979315 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01178 16 31533496 31541251 Pte16g01178 16 31533496 31541251 RCT