Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01162 ATGAGTGCCTATTTTATTGGCCTCCTAGTTCCGCTTGTATTTACATTTATTCTTCGGAACTCGAAGGATAAAAAGCAACGGGGATTGCCTGCAGATGCTGGCGGGGTACCAGGATATACTGTTAGAAACCATCAATTTGATTCCCCTGTGAAGTCAGCATGGGAAGGTATCTCAACTCTAGCTGAACTATTCGAGCAGGCTTGCAATCTTTATGAACATAAACGCTTGCTTGGAACTAGAAGGTTGATCTCAAGGGAAGTTGAAGTTACGGATGATGGAAGATCTTTTGAGAAGGTTCATATGGGAAATTATGAGTGGTTGACATATGGAAAAGCATTTGAGGTTGTTTGTAACTTTGCTTCTGGCCTAGCTAAGCTTGGTCATTCAAGTGAAGAACGTGCAGCTATCTTTGCTGACACCAGGGAAGAATGGTTTGTCGCTTTGCAGGCTTGCTTCAGGCGCAATATAACTGTTGTGACCATATATGCATCACTGGGAGAGGAAGCGCTGTGCCACTCTTTAAATGAGACTGAAGTAACAACTGTAATCTGTGCGCACAAAGAGTTGAAGAAACTTGTAGATATAAGCGGACAACTTGATACTGTGAAACGTGTGATTTGCATGGACAATGAGATCCCAACTAATGCTTCATCCCATTTTGGGCGAAGGTGGACAGTCATTTCTTTTGCCAATGTGGAAAAGCTTGGCCAAGAAAACCCTGTTGATGCTTATCTGCCCCTTGCTGCCGATATAGCAGTTATAATGTATACAAGTGGGAGTACTGGATTGCCTAAGGGTGTAATTATGACTCATTCCAATGTTTTAGCCACAGTTTCTGGTGTTATGACCATTGTTCCTAATCTTGGAAGCAATGATGTCTATTTAGCATATTTACCTTTGGCTCATATCCTAGAGTTAGCAGCTGAGAATATAATTGCAGCAGTTGGAAGTTGTATAGGATATGGAACTCCATTGACTCTTACAGACACATCAAACAAGATTAAAAAGGGAACCAAAGGTGACGCCACTGCACTTCAACCGACTATAATGGCTGCTGTACCGGCAATTCTTGATCGTGTTCGTGATGGGGTTCTCAAAAAGGTGAATGCCAGGGGAGGATTATCCTCAAAATTGTTTCACTTGGCATATGCTCGTAGGTTGTTTGCAGTAAATGGTAGTTGGTTTGGTGCATGGGGCCTGGAAAAGAAGCTCTGGGACCTACTTTTGTTTAGTAAGGTACGAGCAGTTCTTGGAGGTCGCTTGCGGTTCATTCTATCTGGTGGTGCTCCTCTTTCCAGTGATACCCAGAGATTTATCAACATATGCATTGGTTGCCCTATAGGCCAAGGTTATGGGCTCACGGAAACTTGTGCCGGGGGGACATTCTCAGACTTTGATGATACATCAGTTGGTCGTGTTGGACCTCCTCTTCCTTGTTCGTTGATCAAGCTAATCGACTGGCCTGAAGGTGGATACTTAACTAGAGATTCCCCAATGCCTCGAGGGGAAATAGTAGTCGGTGGTCCAAATGTTACTATTGGATACTTCAAAAATGAGGAGAAAACTAAAGAGTCGTACAAGGTGGATGAGAGAGGGATGAGATGGTTTTACACTGGTGATATTGGGAGATTTCATTCAGATGGTTGCCTTGAGATTATTGACCGGAAAAAGGACATCGTTAAACTACAGCATGGAGAATATGTCTCCTTAGGAAAGGTTGAAGTTGCTCTTATTGTCAGCCCTTATGTGGATAACATAATGTTGCATGCTGATCCCTTTCATAGTTACACTGTGGCTCTTGTGGTAGCCTCACAAGCCTCATTAGAGGACTGGGCTTCAAAGGAAGGAATTTCCTTTTCTGATTTACCAGGACTGTGCAAGAAAGAAGAGACTGTGAAGGAAGTCCTTGAATCACTCGTCAAGGAAGCAAAGAAGGCGCGTTTGGAAAAGTTTGAGATCCCTGTAAAAATTAAATTACTTTCTGATCCATGGACTCCTGAATCAGGGTTGGTCACTGCAGCACTCAAGCTCAAGAGAGATGTCATCAGGAAAACTTTCTCTGATGAACTTTCTAAGTTATATGCATCTTAA 2091 0.429 MSAYFIGLLVPLVFTFILRNSKDKKQRGLPADAGGVPGYTVRNHQFDSPVKSAWEGISTLAELFEQACNLYEHKRLLGTRRLISREVEVTDDGRSFEKVHMGNYEWLTYGKAFEVVCNFASGLAKLGHSSEERAAIFADTREEWFVALQACFRRNITVVTIYASLGEEALCHSLNETEVTTVICAHKELKKLVDISGQLDTVKRVICMDNEIPTNASSHFGRRWTVISFANVEKLGQENPVDAYLPLAADIAVIMYTSGSTGLPKGVIMTHSNVLATVSGVMTIVPNLGSNDVYLAYLPLAHILELAAENIIAAVGSCIGYGTPLTLTDTSNKIKKGTKGDATALQPTIMAAVPAILDRVRDGVLKKVNARGGLSSKLFHLAYARRLFAVNGSWFGAWGLEKKLWDLLLFSKVRAVLGGRLRFILSGGAPLSSDTQRFINICIGCPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSLIKLIDWPEGGYLTRDSPMPRGEIVVGGPNVTIGYFKNEEKTKESYKVDERGMRWFYTGDIGRFHSDGCLEIIDRKKDIVKLQHGEYVSLGKVEVALIVSPYVDNIMLHADPFHSYTVALVVASQASLEDWASKEGISFSDLPGLCKKEETVKEVLESLVKEAKKARLEKFEIPVKIKLLSDPWTPESGLVTAALKLKRDVIRKTFSDELSKLYAS* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01162 696 Coils Coil 626 646 - -
Pte16g01162 696 Gene3D - 56 555 IPR042099 -
Pte16g01162 696 Pfam AMP-binding enzyme 98 563 IPR000873 -
Pte16g01162 696 ProSitePatterns Putative AMP-binding domain signature. 254 265 IPR020845 -
Pte16g01162 696 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 42 694 - -
Pte16g01162 696 CDD LC_FACS_euk1 102 682 - -
Pte16g01162 696 SUPERFAMILY Acetyl-CoA synthetase-like 57 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01162 Pte-Chr16 31336647 31341528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01162 21 695 Acyl Lipid Metabolism Gene Families AT2G04350 64.402 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01162 K01897 - zju:107421067 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01162 16 31336647 31341528 Pte16g01162 16 31336647 31341528 RCT