Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00786 ATGGCGGTGCTTTTCCTTCTGCTGCTACTGTCTACATCGTCTATTGTTTCAGCTGATGAAGATGCATTCATTGGTGTGAACATTGGAACTGATGTTTCAGTTATGCCACATCCAACTCAAGTAGTGGCTCTTCTCAAAGCACAGCAAATTCGACATGTCCGTTTGTATAATGCTGACACAGCTATGCTTGTTGCCCTTGCTAATTCTGGGATTCGTGTAGTTATCTCTGTCCCTAACGAAGAACTCCTTGCAATTGGACAATCAAATTCGACCGCTGCTAACTGGGTTTCCCACAATGTTGTAGCACATTATCCAGCTACGAACATCACTGCCATTGCTGTTGGTTCTGAGGTCCTAAACACTCTCCCTAATGCTGCAAAAGTGCTTGTCAATGCCTTAAGATACATACATTCAGCTCTTGTGGCATCAAATCTCGACCGTCAAATAAAAGTTTCGACACCCCTTTCGTCCTCAATGATTCTTGATTCATTTCCACCTTCCCAGGCCTTCTTCAATCGCTCCTGGAACCCAGTCTTGATCCCCATGCTTAATTTTCTACAGTCTACTGACTCATTCCTCATGCTTAATATATATCCTTACGATGTTTACATGCAATCAAATGGTGTGATCCAACTAGATTACTCACTTTTCAGGCCTCTTGCGCCAACCAAAGAAGCTGTGGATTCTAACACTCTTCTACATTACACTAATGTCTTTGATGCAATGGTGGATGCAGCGTATTTCGCCATGGCTTTTCTTAACTTCACCAATATTCCAGTTGTTGTAACTGAATCCGGATGGCCGTCCAAAGGGGACTCTAAGGAACCTGATGCAACATTGGAGAATGCTAACATATACAACAGTAATTTAATTAGGCATGTGCTGAACAAAACTGGAACTCCAAAACACCCTGGAATCGCTGTTAGCACTTACATCTATGAGCTATATAATGAGGATACCAAGCCAGGGCCGATTTCGGAGAAGAACTGGGGATTGTTTAATACAGATGGAGATCCTGTTTACATTTTACACTTGACAGAATCAGGAGCAGTGTTGGCAAATGACACTACCAATCAAACATACTGTACGGCTAGAGATGATGCCGATCCGAAAATGCTGCAGGCTGCGCTTGATTGGGCATGTGGACCTGGAAAAGTGGATTGCTCAGCCATGATGCAGGGACAACCCTGTTATGAACCGGACAATGTGATTGCTCATGCCACCTATGCTTTTGATGGGTACTATCATAAAATGGGGAAAGTTCCCGATGCCTGTGACTTCAATGGAGTTGCTTCTATCAGTACATCAGATCCAAGTCATGGTTCGTGTATGTTTCCAGGAAGTCTTGGGGAAAACGGTACTTTGGGTAACTTTACAGCGCCTTCAATGAACTCCTCATCAATTGCAGATTCTTCAGCCTACGATCTCCATGGCAATGTTGTCACAATCCTTGCAACTTTGATTGGAGTTCTAATATGGGCACCAGCTTTGCTGTAG 1497 0.4355 MAVLFLLLLLSTSSIVSADEDAFIGVNIGTDVSVMPHPTQVVALLKAQQIRHVRLYNADTAMLVALANSGIRVVISVPNEELLAIGQSNSTAANWVSHNVVAHYPATNITAIAVGSEVLNTLPNAAKVLVNALRYIHSALVASNLDRQIKVSTPLSSSMILDSFPPSQAFFNRSWNPVLIPMLNFLQSTDSFLMLNIYPYDVYMQSNGVIQLDYSLFRPLAPTKEAVDSNTLLHYTNVFDAMVDAAYFAMAFLNFTNIPVVVTESGWPSKGDSKEPDATLENANIYNSNLIRHVLNKTGTPKHPGIAVSTYIYELYNEDTKPGPISEKNWGLFNTDGDPVYILHLTESGAVLANDTTNQTYCTARDDADPKMLQAALDWACGPGKVDCSAMMQGQPCYEPDNVIAHATYAFDGYYHKMGKVPDACDFNGVASISTSDPSHGSCMFPGSLGENGTLGNFTAPSMNSSSIADSSAYDLHGNVVTILATLIGVLIWAPALL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00786 498 Pfam X8 domain 361 431 IPR012946 -
Pte16g00786 498 SUPERFAMILY (Trans)glycosidases 24 343 IPR017853 -
Pte16g00786 498 Gene3D Glycosidases 23 350 - -
Pte16g00786 498 Gene3D - 354 446 - -
Pte16g00786 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 9 433 IPR044965 GO:0004553|GO:0005975
Pte16g00786 498 Pfam Glycosyl hydrolases family 17 24 343 IPR000490 GO:0004553|GO:0005975
Pte16g00786 498 FunFam Glucan endo-1,3-beta-glucosidase 4 355 449 - -
Pte16g00786 498 SMART X8_cls 360 445 IPR012946 -
Pte16g00786 498 FunFam Glucan endo-1,3-beta-glucosidase 3 23 348 - -
Pte16g00786 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00786 Pte-Chr16 26064531 26067550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00786 18 467 Glycoside Hydrolase AT1G66250 74.558 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00786 K19891 - qsa:O6P43_020580 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00786 16 26064531 26067550 Pte16g00786 16 26064531 26067550 RCT