Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00780 ATGTTATCGGCTGAGAAGATTTGTTCCTTCAAGGAAAAAATGGTAGCTTTGGTTTCTCAAGAAAATGTGGTTGCCTTGGTTTCTCGTACTGGCAGACACTTGCAGCGCTACAATAAAGGGCGTCGCCAAGTTGTGGGATGTATACCGTACAGATATAAGATAGAGCAACATAACTCAATGGAAGCCAATGAATTAGAAGTTTTGGTCATTACTTCACAAAAAGGCACAGGCATGTTATTCCCAAAGGGAGGTTGGGAGTTGGATGAGTCTAAAAAGCAGGCAGCTCTAAGAGAGACCATAGAGGAAGCTGGGGTTAGAGGCGTTGTTGAGAGAAAATTAGGGAAATGGAGTTTCAAGAGCAAAACCCATGACACTTACTATGAAGGATACATGTTCCCTTTGCTTGTTCAAGAGCAATTAGATTTATGGCCAGAGAAGAACTTCCGGCAGAGAAAATGGATGAGCGTGAATGAAGCAAGAGAAGTATGTCAGCATTGGTGGATGAAAGAAGCGTTAGACAGATTAGTGAATCGTCTGACTTCTCAAAAAAAATGCTCATGA 561 0.4189 MLSAEKICSFKEKMVALVSQENVVALVSRTGRHLQRYNKGRRQVVGCIPYRYKIEQHNSMEANELEVLVITSQKGTGMLFPKGGWELDESKKQAALRETIEEAGVRGVVERKLGKWSFKSKTHDTYYEGYMFPLLVQEQLDLWPEKNFRQRKWMSVNEAREVCQHWWMKEALDRLVNRLTSQKKCS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00780 186 ProSitePatterns Nudix box signature. 83 104 IPR020084 GO:0016787
Pte16g00780 186 FunFam Nudix hydrolase 17, mitochondrial 27 178 - -
Pte16g00780 186 CDD Nudix_Hydrolase_9 43 169 IPR047198 GO:0016462
Pte16g00780 186 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 26 179 - -
Pte16g00780 186 SUPERFAMILY Nudix 32 179 IPR015797 -
Pte16g00780 186 ProSiteProfiles Nudix hydrolase domain profile. 40 176 IPR000086 -
Pte16g00780 186 Pfam NUDIX domain 66 173 IPR000086 -
Pte16g00780 186 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 27 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00780 Pte-Chr16 25919678 25922467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00780 K07766 - gmx:100305863 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00780 16 25919678 25922467 Pte16g00780 16 25919678 25922467 RCT