Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00728 ATGGGATTGCTATCAAACAAGATTGCCAGGGAGACACTGAAGCCTGGAGATCACATTTACTCATGGAGACAAGCCTATGTCTATGCCCATCACGGAATATATGTTGGAGCTAGGAAGGTGATTCACTTCACTCGAGGGGCAGGCCAAGAGATTGGTACAGGAACTGTGTTAGACCATTTACTTATCAGCTCATCTCCCTCTCACAATGCTGACAACATGTGCCAAGTTTGTGGTGATCAATCAAACAAGGATGGGGTGATATCTTCCTGTTTGGATTGTTTTCTTGCTGGTGGAGACGTATATCTTTTTGAGTATGATGTCTCTCCAGTTCTTTTCCTTGCCAAAGCTCGTGGAGGTACTTGCACTCTTGCAGCATCCGATCCTCCTGAAGATGTCCTTCATCGTGCTTCCTATCTTCTGCAAAACGGATTTGGGGTTTACAATATCTTCAAGAATAATTGTGAAGACTTTGCTATATACTGCAAAACCGGTCTGCTTGTGTTTACCAACATCAGTGTAGGTCGTAGTGGACAGGCAGCCTCCTGCTTAGCTGCAGCTAGTGCTATCATTTCTTCACCACTTCGCTTCTTGACTACCAGTTTTACTGGTCTTGCTGTTGTGGGATATGGCATGTATTGCGCCAGCCGTTTTGTTTCGGATGTCGGCATACGGCGTGATGTGTCCAAAGTTCCTGTTGAGAGACTTGTTGCTCGCGCAGAGACAGATGAAGTTCTTCCAGAGAATGCTGCCATGACTCCCAAGGAAGACTAG 771 0.4591 MGLLSNKIARETLKPGDHIYSWRQAYVYAHHGIYVGARKVIHFTRGAGQEIGTGTVLDHLLISSSPSHNADNMCQVCGDQSNKDGVISSCLDCFLAGGDVYLFEYDVSPVLFLAKARGGTCTLAASDPPEDVLHRASYLLQNGFGVYNIFKNNCEDFAIYCKTGLLVFTNISVGRSGQAASCLAAASAIISSPLRFLTTSFTGLAVVGYGMYCASRFVSDVGIRRDVSKVPVERLVARAETDEVLPENAAMTPKED* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00728 256 ProSiteProfiles LRAT domain profile. 20 170 IPR007053 -
Pte16g00728 256 Gene3D endopeptidase domain like (from Nostoc punctiforme) 4 170 - -
Pte16g00728 256 Pfam Lecithin retinol acyltransferase 12 166 IPR007053 -
Pte16g00728 256 PANTHER OS05G0310600 PROTEIN 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00728 Pte-Chr16 24168670 24171534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00728 - - vvi:100251247 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00728 16 24168670 24171534 Pte16g00728 16 24168670 24171534 RCT