Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00725 ATGGAAGAGCTAAAACCAACTCCTCCAAACTCACCACCGTTGACAACACTGGTTTTTTTAGAAAGAGCAGCCACCATCTACGCTGACTGCAAGTCTATCATCTATAACGACACAGTCTACACGTGGTCTCAGACTCACCGTCGATGCCTTCAACTAGCTTCTGCTCTTGTATCCACCGGTATCAGGCGTGGCCACGTGGTTTCCGTCTTCGCACCCAATATCCCAGCCATGTATGAGCTTCACTTTGCTGTACCCATGGCCGGAGCTATCCTCAACGCAATTAATATCCGACTAGACGCCCGTACCGTCTCCGTCATCCTGCAGCACAGTGATTCCAAGCTCGTGTTTGTTGATTGTGTTTCAAGTGCTCTGGTACTGGAAGCGTTGTCTCTGTTACCGGCAAATTCTCAACGACCTCGTCTCATCCTTATCAACGATGATACAACTGAGCCATCATCTTCCTCTTGGACTGTGGATTTCATTGATACTCATGAAGGTTTGTTGATGAAGGGTGATCCTCATTTTAACTGGGTCCGTCCCAACAGTGAATATGAACCGATGGTATTGAACTACACGTCTGGAACGACGTCGTCGCCAAAGGGTGTGGTTCACTGTCACAAAGGGATATTCCTAATCACAGTCGATTCCCTCATCCATTGGTCTGTACCGAAACAACCGGTTTATCTATGGACCTTACCGATGTTCCACGCTAATGGATGGAGCTACCCGTGGGGGATAGCTGCCGTTGGTGGCACTAACATCTGCGTCCGTAAATTCGACGCGCCAGTCGTGTACGGTTTGATCGAGCGCTACGGTGTGACGCACATGTGCGGTGCACCTGTGGTGCTCAACATGCTAACAAACTCAACCAATAACAAACCTCTGAAAAACCCGGTTCATATCATGACAGCCGGAGCTCCACCACCGGCAGCCATTCTCTTCCGTACAGAGTCACTGGGTTTCAAAATCACGCATGGATACGGGTTGACAGAAACCGCTGGATTAGTCGTGTCATGCACGTGGAAGCGAGAGTGGGACCGGTTGCCGGCAGCAGAGAGAGCAAGGTTGAAGGCGAGACAAGGAGTGAAGACTATCGGGTTGACAGAGATGGATGTGGTGGATCCTGAGTCAGGGATGAGTGTGAAGCGAGACGGGACAACACTCGGCGAGGTCGTCCTGAAAGGTGGATGTGTGATGCTGGGTTATCTCAAAGACCCCGTGGGTACCTCGAAAGCCATGAAGAATGGTTGGTTCTACACCGGCGATGTGGCGGTGATGCACCCAGATGGGTACCTGGAAATCAAGGACAGATCGAAGGATGTGATCATCAGTGGCGGGGAAAATCTGAGCAGTGTGGAGGTGGAGTCGGTGTTGTACACTCATCCTGCTATAAACGAGGTTGCAGTGGTGGCAAGGCCTGATGAGTTTTGGGGTGAGACGCCATGTGCGTTTGTAAGCTTGAAAGAAAGATTGGAGAAGAAACCAACAGAGAAAGAGATCATCGAGTTCTGCAGAGCCAAGTTGCCTGGGTATATGGTTCCAAAAACGGTGGTTTTTAAGGACGAGCTTCCGAAGACATCAACGGGGAAGATCCAAAAGTTTGTGCTCAGAGAGATGGCCAAAGCTCTGGGGTCAATGAAGAGCAGTCGACTGTAG 1656 0.5036 MEELKPTPPNSPPLTTLVFLERAATIYADCKSIIYNDTVYTWSQTHRRCLQLASALVSTGIRRGHVVSVFAPNIPAMYELHFAVPMAGAILNAINIRLDARTVSVILQHSDSKLVFVDCVSSALVLEALSLLPANSQRPRLILINDDTTEPSSSSWTVDFIDTHEGLLMKGDPHFNWVRPNSEYEPMVLNYTSGTTSSPKGVVHCHKGIFLITVDSLIHWSVPKQPVYLWTLPMFHANGWSYPWGIAAVGGTNICVRKFDAPVVYGLIERYGVTHMCGAPVVLNMLTNSTNNKPLKNPVHIMTAGAPPPAAILFRTESLGFKITHGYGLTETAGLVVSCTWKREWDRLPAAERARLKARQGVKTIGLTEMDVVDPESGMSVKRDGTTLGEVVLKGGCVMLGYLKDPVGTSKAMKNGWFYTGDVAVMHPDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHPAINEVAVVARPDEFWGETPCAFVSLKERLEKKPTEKEIIEFCRAKLPGYMVPKTVVFKDELPKTSTGKIQKFVLREMAKALGSMKSSRL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00725 551 PANTHER ACYL-ACTIVATING ENZYME 2 547 - -
Pte16g00725 551 CDD ttLC_FACS_AEE21_like 12 538 - -
Pte16g00725 551 FunFam 2,3-dihydroxybenzoate-AMP ligase 439 544 - -
Pte16g00725 551 Gene3D - 4 439 IPR042099 -
Pte16g00725 551 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Pte16g00725 551 FunFam Long-chain-fatty-acid--CoA ligase FadD 2 439 - -
Pte16g00725 551 Gene3D - 440 543 IPR045851 -
Pte16g00725 551 Pfam AMP-binding enzyme 22 444 IPR000873 -
Pte16g00725 551 Pfam AMP-binding enzyme C-terminal domain 453 530 IPR025110 -
Pte16g00725 551 SUPERFAMILY Acetyl-CoA synthetase-like 9 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00725 Pte-Chr16 24131137 24133583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00725 1 543 EF-hand Containing Proteins AT1G21540 63.636 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00725 - - qsa:O6P43_030773 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00725 16 24131137 24133583 Pte16g00725 16 24131137 24133583 RCT