Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00505 ATGTTTATAGAACATCTCTCATTCAACGACAAACCTGTAAGTGGAGCTGCTACAGGTCCAATTGGTAAGGAACTTTTTGAGAAAGAGCAGGAGGACCTTATTTCAGATCTAAAAGATATACCAAAGAAGGCCTGTGACCGTCGAATCAATGAGTTTGTCAAACGTGCCCGTGCTGCGAAGATACATGCTTACATCATTAATCACCTAAGAAATGAGATGCCTGCCTTTATGGGGAAAACAAAGGCTCAGCAAAGGCTTATTGATAATTTGGAAAATGAATTTGCAAAGGTACAACGAGTGCATCATCTCCCTCCGGGAGATTTCCCTAATGTTGAGCATTTCAGGGAGACCTTGGGGGGTTTCAGTATTGACAAGTTTGAGAAATTGAAACCGAAAATGATACAAGCAGTTGATGACATGCTGGGTTATGAAATCCCAGACCTTTTGAAGACTTTCAGAAACCCCTATGATTGA 474 0.4114 MFIEHLSFNDKPVSGAATGPIGKELFEKEQEDLISDLKDIPKKACDRRINEFVKRARAAKIHAYIINHLRNEMPAFMGKTKAQQRLIDNLENEFAKVQRVHHLPPGDFPNVEHFRETLGGFSIDKFEKLKPKMIQAVDDMLGYEIPDLLKTFRNPYD* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00505 157 Coils Coil 80 100 - -
Pte16g00505 157 Pfam Domain of unknown function (DUF5600) 47 148 IPR040990 -
Pte16g00505 157 Gene3D - 20 155 - -
Pte16g00505 157 PANTHER EH DOMAIN 8 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00505 Pte-Chr16 8441221 8443938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00505 7 158 EF-hand Containing Proteins AT3G20290 80.921 3.89e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00505 K12483 - egr:104450264 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00505 16 8441221 8443938 Pte16g00505 16 8441221 8443938 RCT