Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00504 ATGATTTTCTCAAAGTTTTTATCTCGTGTCTCACGAACTGTTAGCCGGAGCTCTCTGCTGCTTCCAGCTCCGCAAAAATCACAGCAGTTGCCAACCTTCGCCAATGAGTTTCATTCACTTGTTCACAGCTTACCCAATAAGCTGGTTCCAAGTCAGGTGATTCTGTTGCAGCAGTCCTATTTCAATGTACCTTCATGTCCAAGAGCAGGATTTTCATCAAATGCTTCACCCGAGTCCTCTGAGAAAGATCGCTGTGATCCTGCAAAAGTAAATGGAGAAGCTAATGCTGAGGATGTGACTTCAAGAGAAGCCGAAAAAAAAGGAACAAGTCCTAGTCCAGAATCTGGGTCTGAATCTGCTAAAAGAAGGAGAGGTAGTAAAAGAACTGCATTTTCTGATTCAGATTCAGATTCAGAGAATGAGAATGCAGAAGATCTGTGTAGAGATGATTTGGTAAAGCTCGTGACAGAGAAAGATGAAATTTTGAAATTGAAGCAAAAGGAAATGGACCAAATGCAAGATAAAGTTCTACGAACTTATGCAGAGATGGAGAATATCATGGACAGAACAAGGCGTGAAGCAGAAAACTCCAAGAAGTTTGCCATTCAGAGCTTTGCGAAGAGTTTACTAGATGTGGCTGACAATTTGGGAAGAGCATCGTCAGTTGTCAAAGAAAGCTTCTCAAAAGTTGATACTTCAAATGACTCTGCTGGAGCAGTACCAGTTCTCAAAACACTTCTGGAAGGTGTTGAGATGACTGAAAAACAACTTGCTGAGGTTTTTAGAAAGTTTGGAGTAGAAAAATTTGATCCCATCGATGAGCCGTTTGATCCACATAGGCATAATGCTATTTTCCAAGTCCCAGATAATTCAAAGCCTCCTGGCACTATTGGAGCTGTTCTAAAGGCAGGATACATGCTATATGATCGTGTCATCCGTCCAGCTGAAGTTGGGGTGACCCAAGAGTCTGAGAACAATAATGCTGACCAAAAATGA 996 0.4167 MIFSKFLSRVSRTVSRSSLLLPAPQKSQQLPTFANEFHSLVHSLPNKLVPSQVILLQQSYFNVPSCPRAGFSSNASPESSEKDRCDPAKVNGEANAEDVTSREAEKKGTSPSPESGSESAKRRRGSKRTAFSDSDSDSENENAEDLCRDDLVKLVTEKDEILKLKQKEMDQMQDKVLRTYAEMENIMDRTRREAENSKKFAIQSFAKSLLDVADNLGRASSVVKESFSKVDTSNDSAGAVPVLKTLLEGVEMTEKQLAEVFRKFGVEKFDPIDEPFDPHRHNAIFQVPDNSKPPGTIGAVLKAGYMLYDRVIRPAEVGVTQESENNNADQK* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00504 331 ProSitePatterns grpE protein signature. 276 319 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pte16g00504 331 MobiDBLite consensus disorder prediction 117 135 - -
Pte16g00504 331 MobiDBLite consensus disorder prediction 79 109 - -
Pte16g00504 331 CDD GrpE 170 319 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pte16g00504 331 PRINTS GrpE protein signature 300 319 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pte16g00504 331 PRINTS GrpE protein signature 273 288 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pte16g00504 331 PRINTS GrpE protein signature 177 193 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pte16g00504 331 FunFam GrpE protein homolog 265 321 - -
Pte16g00504 331 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 266 322 IPR009012 GO:0006457
Pte16g00504 331 Hamap Protein GrpE [grpE]. 82 321 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pte16g00504 331 Gene3D - 151 264 IPR013805 -
Pte16g00504 331 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 159 265 IPR013805 -
Pte16g00504 331 Gene3D Head domain of nucleotide exchange factor GrpE 265 320 IPR009012 GO:0006457
Pte16g00504 331 FunFam GrpE protein homolog 149 264 - -
Pte16g00504 331 MobiDBLite consensus disorder prediction 70 144 - -
Pte16g00504 331 PANTHER GRPE PROTEIN 19 324 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pte16g00504 331 Pfam GrpE 157 320 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00504 Pte-Chr16 8433822 8437321 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00504 K03687 - tcc:18593425 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00504 16 8433822 8437321 Pte16g00504 16 8433822 8437321 RCT