Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00501 ATGGGAAGTGAGAATGAGCCAGCGAAACTACTCTTGCCGTATCTCCAACGAGCCGATGAGTTGCAGAAGCACGAACACCTCGTCGCATATTACTGTCGTTTATATGCGATGGAACGTGGACTGAAGATTCCACAAGGTGAACGTACTAAGACTACAACTGCCCTCCTTGTTTCCCTAATGAATCAGCTCGAAAAGGATAAGAAGTCGCTGAAGTTGGGTCCTGAAGATAGTTTCCATGTTGAGGGGTTTGCCCTTAATGTCTTTGCCAAGGCCGATAAGCAAGATCGTGCTGGCCGAGCAGATCTGAACACAGCAAAAACGTTTTATGCTGCAAGCATATTTTTTGAGATTCTTAACCAGTTTGGGCCGCTTCAGCCTGATCTTGAACAAAAACAGAAGTATGCAGTCTGGAAAGCAGCAGATATAAGGAAGGCACTGAAAGAAGGGAGGAAGCCCATACCTGGCCCACCTGCTGGTGATGAGGATCTCACTGTTCCTTCAAGCACACCTAATGGTGGCTATGTATGTCGCTTATGCATCTTTCTCCCTGAATGTTAG 558 0.4659 MGSENEPAKLLLPYLQRADELQKHEHLVAYYCRLYAMERGLKIPQGERTKTTTALLVSLMNQLEKDKKSLKLGPEDSFHVEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGPLQPDLEQKQKYAVWKAADIRKALKEGRKPIPGPPAGDEDLTVPSSTPNGGYVCRLCIFLPEC* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00501 185 Gene3D - 4 152 IPR023175 -
Pte16g00501 185 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 172 IPR044538 GO:0032511
Pte16g00501 185 Pfam Vta1 like 13 148 IPR039431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00501 Pte-Chr16 8416560 8418249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00501 1 118 Glycosyltransferase AT2G31960 25.984 4.22e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00501 K12199 - tcc:18593420 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00501 16 8416560 8418249 Pte16g00501 16 8416560 8418249 RCT