Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00427 ATGCCTCTCACAAATGGAAATCCTTGTGTCTGCCCTGTGTCCAATCTCTTCCTGACCTTCATCGTTCTGTTCACACTCGTATTGTCCCTCTTGTTCATCTCCAACACCGAGACCCACCACAGCACTCCAACTATAGCACGTCATTCTCTTGCTTCTTCCCACGATGGTATCAAAGTCTTTGTTGCCGAACTTCCTAGATCCCTCAACTATGGTCTGCTTGAGAATTACTGGGATTTCCATACTGATTCTAGGCTCGGCAGTGATGCAGACCGTGAAATTCGATCGACCTTTTTGAAGAAAAATCATGGATTTCCACCGTACCCTGAGAATCCGTTGATAAAGCAGTATAGTGCTGAGTACTGGATCATGGGAGATCTGATGACACCTTTGGGATTGAGAACTGGGTCTTTTGCTAAAAGGGTGTTTAGTGTCGATGAGGCTGATGTGATTTTTGTTCCGTTCTTTGCGACGTTGAGTGCAGAAATGCAACTGGGTATGGCTAAAGCAGCGTTTAGGAAGAAAGTTGGGAATGAGGATTATGAGAGGCAGATGGAGGTTGTAGATTTCATCAAGAATACTGAGGCTTGGAAGAGGTCTGGTGGGCGAGACCATGTCTTCGTTCTTACAGACCCTGTTGCTATGTGGCATGTCAGAGCTGAGATTGCCCCAGCCATCCTGCTTGTGGTAGATTTTGGTGGGTGGTACAAGGTTGACACGAAATCGTCAAATGGAAGCTCTGATAAGATCCAGCATACACAAATCTCATTACTGAAAGATGTGATTGTGCCTTACACCCATCTGCTTCCCAGGGTACATTTGTCTGAAAACCAGGACAGGCCTACTCTTCTTTACTTCAAGGGGGCTAAACACAGGCACAGGGGAGGCCTTGTCCGAGAGAAGCTGTGGGATTTGTTGGTGAATGAGCCTGATGTGATCATGGAAGAAGGTTTTCCTAATGCCACTGGGAAGGAGCAATCCATAAAAGGGATGAAGACATCAGAATTCTGCTTGCACCCAGCTGGGGACACCCCCACTTCTTGTCGTCTCTTTGATGCTATTCAAAGTCTCTGTATACCGGTTATTGTCAGTGACAGCATTGAGCTGCCATTTGAAGGCATGATAGACTATTCAGAATTTTCTGTTTTCGTGGCAGTAAGTGATGCACTTAAACAAGGTTGGCTTGTTAATCATCTCAAAGGTTTTCAGAAAGAGCAGAAAGATAGATTCCGGCAGAAAATGGCACAAGTACAACCAATTTTTCAGTATGACAATGGCCATCCAGATGGTATTGGACCGATCCCTGCAGATGGCGCTGTGAATCACATATGGAGAAAGGTTCATCAGAAGTTGCCAATGATCAAAGAAGCCATTGTCAGAGAGAGACGAAAACCATCTGGAGTTTCAGTTCCACTTCGCTGTCACTGTACCTGA 1431 0.4556 MPLTNGNPCVCPVSNLFLTFIVLFTLVLSLLFISNTETHHSTPTIARHSLASSHDGIKVFVAELPRSLNYGLLENYWDFHTDSRLGSDADREIRSTFLKKNHGFPPYPENPLIKQYSAEYWIMGDLMTPLGLRTGSFAKRVFSVDEADVIFVPFFATLSAEMQLGMAKAAFRKKVGNEDYERQMEVVDFIKNTEAWKRSGGRDHVFVLTDPVAMWHVRAEIAPAILLVVDFGGWYKVDTKSSNGSSDKIQHTQISLLKDVIVPYTHLLPRVHLSENQDRPTLLYFKGAKHRHRGGLVREKLWDLLVNEPDVIMEEGFPNATGKEQSIKGMKTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDSIELPFEGMIDYSEFSVFVAVSDALKQGWLVNHLKGFQKEQKDRFRQKMAQVQPIFQYDNGHPDGIGPIPADGAVNHIWRKVHQKLPMIKEAIVRERRKPSGVSVPLRCHCT* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00427 476 Pfam Exostosin family 55 397 IPR040911 -
Pte16g00427 476 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 44 446 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00427 Pte-Chr16 6105812 6109937 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00427 - - qsa:O6P43_008022 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00427 16 6105812 6109937 Pte16g00427 16 6105812 6109937 RCT