Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00426 ATGGTTGCCATGTTTCGATATTCCACTGTGGCTACTTTTACTATTGCTCTACCTCCTGAGAAGCTAGAATTTGGGAGAACAGCGAAGCAAGAGTCTCTTCCCGCTGAAACTGAGGATGTTTATGCAAAAGCTATCATACTGTTTACGGAAGTTGAATGTTGTCTGAAAAAGATCAAGGATCAGTTTTCTTCATCAACTTCAAATAATGGTGAAACGATGAAGAAGTTACATGATGCTGAAGAGCTCCTAAAAGAAGAAAAAACATTTTTTGAGATAAACATCAAGAATGTTGTTGCAAACAGTCAGAATATGGGCTCGGTTGCTTACTCACTTCTAAGTATCAATGGACTGATGTGGGAGCTTCTTATTGAATCGTGCATTTGGGAGAGGCGCTTGCATTCAATACTCTCGCATGGTACTAGCAAGGCAGCCTCTCATGTAGCTGAGAGCATTGGGGAAGAGCAGTTCAGTACGAAGGATAAAGGTCCCTCTATTGGAAACACTGGATATCTTAATACGCTTGCAAAATCTAATAATGTGGATAGTTCTGATGTGAATGATAAGTCAGATGCAACTGCTGATAACGGTGAGTTAATTAAAAATGAAGTTCTGATTAAAGATTCTGAGGAAGAGTTTAAAGAACAAGGTGATGTATCTGATGCAACTCTAGAAAATTTGATTCCCCAGAGATTTTGTGACGTAGAGTTTAGTTCAGGACCAGATGCTTCGACCTGTACTCTTTCCCGCTATGGTAGTGCCCAGTCAGATGTTTCAGTTTTATGTGATAATATGCAAGTGAGTGGAAGCACTCCAGTTATTGCTGATACTGGAAATAGTAGTCCAACTGCTGAAAAAGAACAACCCAACAGAAGTGCCTCACTGCATTTACCAGAGCCTGACTTACATAGTTCCAATGAATGGTTTTGGAAATCATTTCCATTCATTCGACAAATAGGCATCAATGATTTCAAAAAGAATTTCCTCCCTACATTTGAATGTATCAGTAGCCACACTCAACAGCATCTACCCATAACCAATCAACTTATAAATGAGGAAGCTTCAAGGTTACACATTCCTCTCAGAAATGAGAATTTTGTTGTATCAGACTACGAGGGTGAGCTATCAAGTGTAATTGCCTGTGCGCTAGCCTTGAGAGATTCACCTGTCAAGAGTGAATTTCATCATGAGGATAACCGAGGAGAGAGTGGAGTGGTAGACACAAACTCTGGCCTTGATAGTTCACATGGTTTGAGCTGCAGTTCTAACATAACCTCAAATATTTCCTCGCCAGATTTGTCTGTTTCAGATACAATCCATTTTTCTGGAAGTGTTTCTTCTGAGGAGCTGCATGTCTCTCGTGCTCCTGAACATCATAGTATTGGAGTCCCTTTGGGGTATTCGCAATCAATTTGGAAGGAAAAATATTTGGTGATTTGCCACTATGCCAACCAGTTCTGTGAACTTCGAAATCGCTGCTGTCCTTCAGAGCTTGATTATATTGCTTCCCTAAGCCGCTGCAGGAATTGGGATGCTAAAGGTGGCAAGAGTAAATCTTTCTTTGCGAAGACCCTTGATGATCGCCTCATCATCAAGGAAATTAAGAAGACAGAATTTGATTCGTTTAGGGGCTTTGCTCCACTATATTTTAAGTACATGAAAGATTCATTTGGGACGGGGAGTCAAACTTGTCTTGCAAAAATCCTTGGAATTTATCAGGTAATTAAGAGGCCAACAAAATCTGCAAAAGAAGCGAAACATGATTTGATAGTGATGGAAAATCTTACATACAATCGAAAAATTTCTCGCCAGTACGATCTCAAAGGCGCTCTTTATGCACGATATAATACAACTGATGCTGCAGGAGATGTTCTTTTGGATCAAAATTTTGTGAATGACATGAACTCTTCTCCGTTGTATGTCAGTCAGAAAGCAAAACGTTACCTTCAGAGGGCTGTTTGGAACGACACCACTTTTCTCAACTCTATCAATGTCATGGATTATTCCCTGCTGGTTGGAGTTGACTCAGACAGACGGGAGCTTGTATGTGGAATAATAGATTATATCAGACAATACACTTGGGATAAGCATTTAGAAACTTGGATGAAGACTTCACTTGCACCCAAGAATTTTTTGCCAACAGTGATCTCACCAAAAGAGTACAAAAAGAGATTCAGGAAATTCATGGCAACACATTTCTTGAGTGTACCAGATAATTGGTGCTCAATGGAATCTACAGTGCCTTGCAAACATTGTAGTCGATAG 2262 0.3996 MVAMFRYSTVATFTIALPPEKLEFGRTAKQESLPAETEDVYAKAIILFTEVECCLKKIKDQFSSSTSNNGETMKKLHDAEELLKEEKTFFEINIKNVVANSQNMGSVAYSLLSINGLMWELLIESCIWERRLHSILSHGTSKAASHVAESIGEEQFSTKDKGPSIGNTGYLNTLAKSNNVDSSDVNDKSDATADNGELIKNEVLIKDSEEEFKEQGDVSDATLENLIPQRFCDVEFSSGPDASTCTLSRYGSAQSDVSVLCDNMQVSGSTPVIADTGNSSPTAEKEQPNRSASLHLPEPDLHSSNEWFWKSFPFIRQIGINDFKKNFLPTFECISSHTQQHLPITNQLINEEASRLHIPLRNENFVVSDYEGELSSVIACALALRDSPVKSEFHHEDNRGESGVVDTNSGLDSSHGLSCSSNITSNISSPDLSVSDTIHFSGSVSSEELHVSRAPEHHSIGVPLGYSQSIWKEKYLVICHYANQFCELRNRCCPSELDYIASLSRCRNWDAKGGKSKSFFAKTLDDRLIIKEIKKTEFDSFRGFAPLYFKYMKDSFGTGSQTCLAKILGIYQVIKRPTKSAKEAKHDLIVMENLTYNRKISRQYDLKGALYARYNTTDAAGDVLLDQNFVNDMNSSPLYVSQKAKRYLQRAVWNDTTFLNSINVMDYSLLVGVDSDRRELVCGIIDYIRQYTWDKHLETWMKTSLAPKNFLPTVISPKEYKKRFRKFMATHFLSVPDNWCSMESTVPCKHCSR* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00426 753 CDD PIPKc_PIKfyve 474 732 IPR044769 GO:0000285
Pte16g00426 753 Gene3D - 594 733 - -
Pte16g00426 753 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 407 732 IPR002498 GO:0016307|GO:0046488
Pte16g00426 753 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 744 - -
Pte16g00426 753 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 418 593 IPR027484 -
Pte16g00426 753 SUPERFAMILY SAICAR synthase-like 471 732 - -
Pte16g00426 753 MobiDBLite consensus disorder prediction 270 289 - -
Pte16g00426 753 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 595 733 - -
Pte16g00426 753 SMART PIPK_2 437 733 IPR002498 GO:0016307|GO:0046488
Pte16g00426 753 FunFam Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family 413 593 - -
Pte16g00426 753 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 680 730 IPR002498 GO:0016307|GO:0046488
Pte16g00426 753 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 512 676 IPR002498 GO:0016307|GO:0046488
Pte16g00426 753 MobiDBLite consensus disorder prediction 270 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00426 Pte-Chr16 6101175 6104330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00426 1 740 Acyl Lipid Metabolism Gene Families AT1G34260 45.539 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00426 K00921 - qsa:O6P43_008023 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00426 16 6101175 6104330 Pte16g00426 16 6101175 6104330 RCT