Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00424 ATGTCGATGCTTGATTCCTTCTTCAAACAGGGTTTTAAAGCTTCAAAATGTAAAACACTACTCAAATTGACAATACCACGGATAAAGTTGCTGAGGAACAGGAGAGATATTCACTTAAAGCAGATGCGTAGAGAAATTGCCAAGCTTCTTGAGACTGGTCAAGAAGCTACTGCTCGCATAAGGGTGGAGCACATTATCCGAGAAGAAAACATGATGGCTGCTCAAGAGATCCTGGAATTGTTTTGTGAACTTATTTCTGTCCGTCTCCCAATTATTGAATCACAAAGGGAGTGTCCTCTCGACTTAAAGGAAGCAATATCTAGTGTTTGCTTTGCTGCACCAAGATGTGCTGATCTGCCGGAGCTGCTGCAAGTTCAATTACTATTTGCATCCAAATATGGGAAGGAATTTGTATCTGCAGCAACTGAGCTCATGCCTAGTTGTGGTGTTAACCGCCAGTTAATAGAGTTATTATCAGTTAGAGCTCCTTCACCAGAGAAGAAGCTGAAGCTTCTGAAAGAAATTGCTGAAGAGCATGGAATAGAGTGGGATCCTGCTGCTTCTGAAACTGAGTTCTTTAAACCACATGAAGACCTATTGAATGGTCCGACAAAGTTCATAGGTGAATCTGAGTTGTCTCTGCCTAATGAAAAGCACGATGAGGCACGGAATTCTGTACCTGAACAGCCCGACAAAGAGCAAGCTGGTTTTGATTCCGATTCTGAATTGGATGATTTATTGCTTCCTGAGGTACCTAAAGTATCACTACGAGCAACTGCAAATGTTAACTCAGAAATGCCAGAAGCAGTGCCACACCCTGAAATTGATGATAAATCATCTGTACACTCTGGAGTTGCTGCTGAATTGAAGCAGCAGCCATATGGTGTAGATGAGGAAGTAACTCGAAGAATCTCAGCTGATGATAAAGATGAACCTTACAGTTCACCTCGTGCAGTTGAGAATAAACAGTTTTTACCATTCCTTTCTCCACCATCTGTATCAACTGCCCCTCTGTCGTCTATGCAAACATTGGCTGGTGCATATTCATCATCTCCATCAACATCATTTCCAGCAGAAAGTGACAACTCCCCTCACGCACTTACAAGGAATAAAAATGAAGCTCATGTGGATTTGCAGGATTCATCATCTCCGTCGAATACATCATTTCAAGTAGGAAGTGACAACTCTCCTCACACACTTCCAAGGAAGAAAAGTGAAGCTAATGTGGATTTGCAGGATTCATCATTTCCGTCAAATACATCATTTCCAGCAGGAAGTGACAACTCTCCTCACACACTTTCAAGGAAGAAAAGTGAAGCTAATGTGGATTTGCAGGATTCAGCATTTCCAGCAGGAAGTGACAACTCTCCTCACACACTTCCAAGGAAGAAAAGTGAAGCTAATGTGGATTTGCAGGACGTAATAGCCGCTGCTCATGCCGCCGCTGAAACAGCTGAACGTGCAGCAGCTGCAGCACGTTCGGCAGCTACTCTTGCACAGGCCAGAATTGGCGAGCTTACCAAGAAAAACAGTGCTAACATCCTTGAATCCAGCTACGAAAATCCATTTCATGGGAGTAGTGATCAGGCTGATGCTGCAGAACAGAAGCATTTCAGTGATCAGTCAACATCTAATGACTCTGATGGAGTTTCTGGAGGTTATTCTGCAACCCACTGGGATTATGGTTCCACAGGAGGATTTGAACATTCCATGGCTACATTTGACAAGTTCAAAGCTGACTTTGATTCATCTCTACCCTACCATCATCTAGCTGGAGAGGCATCTGCGAGTCACCGACCTCAGAGACTGCCATCGATGGAGGATGAGACTTATCTTTCATTTCCAAACCTGTTTACTTCCCAAAATTCAATCAATGGATCCCATTCTCCTCGGAATGTCCGATAG 1905 0.4341 MSMLDSFFKQGFKASKCKTLLKLTIPRIKLLRNRRDIHLKQMRREIAKLLETGQEATARIRVEHIIREENMMAAQEILELFCELISVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQLLFASKYGKEFVSAATELMPSCGVNRQLIELLSVRAPSPEKKLKLLKEIAEEHGIEWDPAASETEFFKPHEDLLNGPTKFIGESELSLPNEKHDEARNSVPEQPDKEQAGFDSDSELDDLLLPEVPKVSLRATANVNSEMPEAVPHPEIDDKSSVHSGVAAELKQQPYGVDEEVTRRISADDKDEPYSSPRAVENKQFLPFLSPPSVSTAPLSSMQTLAGAYSSSPSTSFPAESDNSPHALTRNKNEAHVDLQDSSSPSNTSFQVGSDNSPHTLPRKKSEANVDLQDSSFPSNTSFPAGSDNSPHTLSRKKSEANVDLQDSAFPAGSDNSPHTLPRKKSEANVDLQDVIAAAHAAAETAERAAAAARSAATLAQARIGELTKKNSANILESSYENPFHGSSDQADAAEQKHFSDQSTSNDSDGVSGGYSATHWDYGSTGGFEHSMATFDKFKADFDSSLPYHHLAGEASASHRPQRLPSMEDETYLSFPNLFTSQNSINGSHSPRNVR* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00424 634 MobiDBLite consensus disorder prediction 262 283 - -
Pte16g00424 634 MobiDBLite consensus disorder prediction 345 365 - -
Pte16g00424 634 MobiDBLite consensus disorder prediction 216 241 - -
Pte16g00424 634 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Pte16g00424 634 MobiDBLite consensus disorder prediction 216 239 - -
Pte16g00424 634 Gene3D - 5 192 IPR042277 -
Pte16g00424 634 MobiDBLite consensus disorder prediction 518 551 - -
Pte16g00424 634 PANTHER IST1 FAMILY MEMBER 14 621 IPR005061 GO:0015031
Pte16g00424 634 MobiDBLite consensus disorder prediction 377 398 - -
Pte16g00424 634 FunFam IST1-like protein isoform A 6 192 - -
Pte16g00424 634 Coils Coil 39 59 - -
Pte16g00424 634 MobiDBLite consensus disorder prediction 345 440 - -
Pte16g00424 634 MobiDBLite consensus disorder prediction 536 551 - -
Pte16g00424 634 MobiDBLite consensus disorder prediction 410 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00424 Pte-Chr16 6067842 6071310 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00424 - - rcn:112169977 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00424 16 6067842 6071310 Pte16g00424 16 6067842 6071310 RCT