Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00289 ATGAATTCTAATTTTGCCGTACAAGTTATCTTTCTATTTGGTGATCTGTGCCTTTATTGTCATGAAATTGCCTCTTCACTTCGTACTGAACTGTGGATGAGGAAATGCTGGGGAAGATGTTGGAGACTATACTGGTGTTTTGGATCTCAGAAAAGTAACAAGAAAATCATTCATGCAGTGGTTCCTGAATCCACGGTGCCTGGTGTCACAGCTTCAAGTGCTGAACCTATCGCTTCAACTGCTATTGTTATGCCCTTCATTGCTCCACCTTCTTCTCCGGCATTCCAGTCCATTCCTCCATCTGCTACTCAGTCACCAGTTGGATTATTGTCAGTTGCTTCTCTTGCTGTGAATGCTTACTCCCCTAATGGACCTGTCTCCATTTTTACCATAGGCCCCTATGCATATGAAACTCAATTGGTTTCACCACCAGTGTTTTCTACCTTCACCACCGAACCATCAACGGCTTGTTTTACACCCCCGCCAGAAGCTGTGCAGATGACAACACCTTCATCCCCTGAAGTACCATTTGCACAATTACTAATGTCTTCACTTGAACGCAGTCATAGAAACAGTGGGGTCAATCACAAGTTTTCTTGGTCCCACTATGAATATCAGCAATATCCTGGTAGCCCCAGTGCCCAACTCCTATCACCTGGATCAGCAATCTCAACTTCTGGCACCTCAACTCCTTTCTATGATAGGAGATGTATACTTGAAGTGCGTGTGGGAGAAACACCAAGAATCTTGAGCTTTGAACACTTCTCCAATCATAAATGGGGCTCTGGGCATGGCTCTGGATCATTGACACCTGATGGTGCTGGTCTAGGTTCAAGACTAGGTTCGGGATGTTTGACACCAGACGGTGTTGGAAGTGTTTCGAGGAAGGGTTCTGGATGGGGAACGCCTGATGCTCTGGGGCCAGAATCAAGGTTGAGTTCTGGATGTTTAACACCTGTTAGCGCTGGGCCTAAAACTCAGGAAATTCGTATTTTTGAGAACCAAATTTATGAGGCTACATCTCTTGCCAATCCTGAGGATCGATGTCAACCCGATGCAATTGTTGATCACAGAGTCTCATTTGAGTTAACTGGTGAAGATGTTGCACGTTGTTTTGCCAATAAATCGATGGCATCTTCTACTAATGTAACAGGATCATCACAAGATATGATGGCAGAATCAGAAGTCCAACAGGAAGGATTACCTGAAGAGAGTAATCCTTGTGAGTCATGTTCTGGGAAGATTTGTGTCAAAATTCCTGGAAAAGACTTTGGAGAAGGAGAAAATCAGTGTAGTCGCCGGCATCTTTCTGTCGGTCTTGGTTCTAGCAAAGAATTCAATTTTGATAATTCAAAAACAGATGTTTCAAACAATCCTAACCATGGCCCTAAATGGTGGGCTAATAACAAAGTGGCAGTAGAGGAAGCTAAACCAGGTAAGCTGGTCTTTTTTCCCAGTGATGCAAGCAGATGA 1473 0.4399 MNSNFAVQVIFLFGDLCLYCHEIASSLRTELWMRKCWGRCWRLYWCFGSQKSNKKIIHAVVPESTVPGVTASSAEPIASTAIVMPFIAPPSSPAFQSIPPSATQSPVGLLSVASLAVNAYSPNGPVSIFTIGPYAYETQLVSPPVFSTFTTEPSTACFTPPPEAVQMTTPSSPEVPFAQLLMSSLERSHRNSGVNHKFSWSHYEYQQYPGSPSAQLLSPGSAISTSGTSTPFYDRRCILEVRVGETPRILSFEHFSNHKWGSGHGSGSLTPDGAGLGSRLGSGCLTPDGVGSVSRKGSGWGTPDALGPESRLSSGCLTPVSAGPKTQEIRIFENQIYEATSLANPEDRCQPDAIVDHRVSFELTGEDVARCFANKSMASSTNVTGSSQDMMAESEVQQEGLPEESNPCESCSGKICVKIPGKDFGEGENQCSRRHLSVGLGSSKEFNFDNSKTDVSNNPNHGPKWWANNKVAVEEAKPGKLVFFPSDASR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00289 490 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 32 485 IPR040420 -
Pte16g00289 490 MobiDBLite consensus disorder prediction 292 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00289 Pte-Chr16 3808681 3810814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00289 - - zju:107423668 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00289 16 3808681 3810814 Pte9g00356 9 4201862 4204483 RCT
Pte16g00289 16 3808681 3810814 Pte16g00289 16 3808681 3810814 RCT